Nicotiana tabacum (common tobacco): 107768863
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Entry
107768863 CDS
T04643
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107768863
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107768863
Spliceosome [BR:
nta03041
]
Complex C
Other components
Complex C specific factors
107768863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_30
ResIII
AAA_7
nSTAND3
AAA_23
T2SSE
AAA_29
AAA_11
SRP54
Motif
Other DBs
NCBI-GeneID:
107768863
NCBI-ProteinID:
XP_016443505
UniProt:
A0A1S3XU89
LinkDB
All DBs
Position
Un
AA seq
691 aa
AA seq
DB search
MSQFWKPGTERPRLVDDEEGGVLLYPTSSSSSSGFGYGSLEKQRQRLPVYKYRTDILYLV
ETHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRMIACTQPRRLAVQAVASRVAEEMDVK
LGEEVGYTIRFEDITNEELTRVKFLTDGVLLREMMDDPLLSKYSVIMVDEAHERSLSTDI
LLGLLKKIQRRRPELHIIISSATIEAKSMAAFFNTSKRRRDQEQGPIREPAILSVEGRGF
NVEIFYVDDPVSDYVRAVVSTVLSIHDQERTGDILVFLTGQDDIDAAIQLLTEEAQSSGK
QGLVAVPLYSGLPRADQDLVFSPTPRGKRKVIFSTNIAETSLTLEGIVYVVDSGFSKQRF
YNPISDIENLVVAPISKASARQRAGRAGRVRPGKCFRLYTEDYFASEMPVVGIPEIQRSN
LVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEILYSLGVLDDDAKLTSPTGFQVAEF
PLDPLISKMILASCELGCTEEIITIAATLSIQSIWIPVRGVQKELDEAKLRFAAAEGDHV
TFLNVYKGFIQSNKSSKWCHKNFVNYHAMRKVIEVREQLKRITQRLGIGLKSCEGDMQAV
RKAITAGFFANASRLEPFSHNGMYKTVRTSQEVYIHPSSVLFRVNPKWIVYYSLVSTDRQ
YMRNVITVDPSWLTEAAPHFYQKQMHSSIPQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaattttggaaaccgggaactgaacgtccccgccttgtagatgatgaagagggt
ggtgttcttctctatcctacttcttcctcttcttcctctggatttgggtatgggagttta
gagaagcaaaggcagaggctacctgtgtacaagtacagaactgatatcctttacttagtg
gagactcatgccaccaccattattgttggagaaactggcagtggcaaaaccactcaaatt
cctcagtacctcaaagaagctggttgggctgagggagggcgcatgatagcatgcacccag
ccaaggagactggcagtccaggcagttgcttcaagagttgccgaagaaatggatgttaaa
cttggtgaagaagttggttatactattcgatttgaagatatcacaaatgaggaattaact
agggtcaaatttcttaccgatggagttttgctgagggaaatgatggatgatcctctattg
agcaagtatagtgtgataatggtggatgaagcccacgaaaggtctctctcgacggatatc
ttattgggactactgaaaaagattcaaaggcgtcgtcctgagctacatattataatatca
tcggctacgattgaagcaaaatcaatggctgctttctttaataccagcaaaagacgacga
gatcaggagcaaggaccaataagagaacctgctattctgtcagttgagggtaggggattt
aatgtggagatattctatgttgatgatcctgtttctgattacgttcgggccgttgtttca
acagtgttgtcgatccatgaccaggagcggacgggagatatcttggtgtttctcactggt
caagatgatattgatgctgcaatacagttgctcaccgaagaagcccaaagtagtgggaag
caaggactggttgctgtgccactatactcgggacttcctcgagcagatcaggatcttgtg
ttttcccctactcctagaggaaagagaaaagtgatattttcaacgaatattgctgagacg
tcattgactttagagggtattgtctatgttgttgatagcgggttctcaaaacaacgcttc
tacaacccgatttcagatattgagaatttggtagtggcacccatatcaaaggcatctgct
cggcaaagggctggtagagctggaagagttcgaccggggaagtgttttaggctctacaca
gaagattattttgccagtgagatgcctgttgtgggaatacccgagatacagagatcaaac
cttgtttcctgtgtcatccagttgaaggccttaggcatcgataatatcttgggttttgat
tggccagcatctccatctcctgaagcgatgataagagcacttgaaatactgtattcactt
ggagtattagatgacgatgccaaacttacttcacctactggattccaggttgcagagttt
ccactggacccattaatatctaaaatgatcttggcttcttgtgagttaggatgtactgag
gaaataattaccattgctgctacgctctccatacagtctatttggattcctgttagagga
gtacagaaggagttggatgaagcaaagttgagatttgcagctgccgagggagaccatgtc
acattcttaaatgtgtataaaggattcattcaatctaataaatcttcgaagtggtgtcac
aagaattttgtaaactatcatgccatgagaaaagtaattgaagttagagaacaactgaaa
aggattacacaacggttgggcataggattgaaatcttgcgaaggggatatgcaggcagta
aggaaggcaattacggcaggtttttttgccaatgcttcccgtttagaaccattcagtcac
aatgggatgtacaagactgtcagaacttctcaagaagtttatattcatccttcatctgtg
ctgttcagggtcaacccgaagtggatcgtatactattctcttgtttcaacggatcgtcag
tacatgcgaaatgtcattactgttgatccttcttggctgacggaagctgcaccacatttt
tatcagaagcagatgcatagttctattcctcaatga
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