KEGG   Nicotiana tabacum (common tobacco): 107769132
Entry
107769132         CDS       T04643                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107769132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107769132
   03036 Chromosome and associated proteins [BR:nta03036]
    107769132
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107769132
 Complex B
    107769132
 Complex C
   U2 SnRNP specific factors
    107769132
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107769132
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N HEAT_Maestro UME MMS22L_C
Other DBs
NCBI-GeneID: 107769132
NCBI-ProteinID: XP_016443804
UniProt: A0A1S3XVA1
LinkDB
Position
Un
AA seq 835 aa
DYQYFGSLLNEEDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGP
LFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYAR
VEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA
VCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLA
ALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAVYASYYTKEVM
VILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPDYIRQDILPEFFRNFWVRRMALDRRNY
KQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEE
LLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQ
QAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAH
KKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAA
SAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVILNY
CLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPILEDDETNVFSRPELNMFI
NT seq 2508 nt   +upstreamnt  +downstreamnt
gattaccagtattttggttccttgttgaacgaggaagatgaagaggagttgtctcccgat
gaacagaaggagcggaagattatgaagcttttgctcaaggttaaaaatggcacaccccct
cagaggaaaactgctttgagacagcttactgataaggccagagaatttggtgcggggccc
ttatttaatcgaattctgccattgctcatgcaacccacattggaagaccaagaaaggcac
ttgctggttaaagttattgatagggtactctacaaattggatgaattggttcgcccgtat
gtgcacaagattcttgtcgttattgaacctcttctgattgatgaagattattatgctcgt
gttgaaggaagggaaattatatctaatcttagcaaggcagctggcttggcgactatgatt
gctgccatgcgtccagatattgacaacattgatgagtatgtcaggaacacaactgctcga
gcttttagtgttgtagcgtctgcactcggtattcctgctttgctgccgttcctgaaagca
gtttgtcagagtaagaagtcttggcaggctcgtcatacgggtattaagattgttcagcag
atcgctattctcattggttgtgctgttcttccacatttgaggtctttggtggaaattatt
gaacatggtctcaatgatgagaaccagaaggtcagaactattacagctctttctctggct
gctcttgctgaagctgctgcgccgtacggtattgagagttttgattcagttttgaagccc
ttatggaagggtattagatcacatcgtggcaaggttttggctgccttcttaaaggctata
ggtttcatcattcctcttatggatgctgtatatgccagctactataccaaagaagttatg
gttattcttattcgtgagtttcaatcacctgacgaggagatgaagaaaattgtgttgaaa
gtggtgaagcagtgcgtgagtacagaaggtgtggagccggattacatccgtcaagacata
cttccagagttcttcaggaacttctgggtcagaagaatggctttggaccgcagaaactac
aagcagcttgttgaaaccactgtggagatagcgaacaaagttggtgtagctgatatagtt
gggagaattgtggaagacctcaaagatgaaagtgaaccataccgaagaatggtcatggag
accattgagaaagtggttgcaaatcttggtgcatctgatattgatgctcgattggaagag
cttttaattgatggaatcctttatgccttccaagagcagaccagtgacgatgccaacgtg
atgcttaacggatttggtgctgttgtaaatgcacttggccaaagagttaaaccatacctt
cctcagatttgtggtaccataaaatggcgactgaacaacaagagtgcaaaggtgagacag
caagctgcagatctgatatccagaattgcagtggttatgaagcagtgtggggaagagcaa
ctaatgggccatcttggtgttgtcttgtatgagtacttgggagaagaatacccagaagtt
ctaggatctatactgggggctctcaaggctattgtgaatgttattggtatgaccaagatg
acacctccaattaaggacttgcttcctcggttgaccccaattttgaagaatcgtcacgag
aaagttcaggagaactgtattgaccttgttggtcgaattgcagatcgtggagctgaattt
gttcctgcaagggagtggatgagaatttgttttgagcttcttgagatgcttaaagcccac
aagaaaggtatccgtcgagcaacagtgaacacatttgggtacattgctaaagctattggg
cctcaggatgtgcttgcaacattgttgaacaaccttaaggtgcaggaacgtcagaaccgt
gtctgcaccactgtcgccattgctattgttgcagaaacctgttctccctttacagtcttg
cctgccttgatgaacgaatatcgagtccctgagcttaatgttcagaatggtgtcttgaaa
tctctctccttccttttcgagtacattggagaaatgggcaaggactatatatatgctgtg
actccattattggaagatgctctaatggacagagatcttgtacacaggcagactgctgcc
tctgctgtgaagcacatggctcttggagttgctggtcttggatgtgaagatgcgcttgtc
caccttttgaactacgtctggccaaacatttttgagacttctccacatgtgatcaatgca
gttatggaagccattgaaggaatgagggttgcactgggagcagccgtaatccttaactat
tgtctgcaggggttgttccatccagcaaggaaagttagggaagtgtactggaagatttac
aattctctgtacattggcgctcaggatgcacttgtagctgcttatcccattctggaagat
gatgaaaccaatgttttcagtaggcctgagctcaacatgtttatttag

DBGET integrated database retrieval system