Nicotiana tabacum (common tobacco): 107769852
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Entry
107769852 CDS
T04643
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107769852
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
107769852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
zf-RING_2
Lactamase_B
zf-rbx1
zf-RING_11
zf-C3HC4
Anti-Pycsar_Apyc1
zf-C3HC4_2
Lactamase_B_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_10
TgpA_N
DUF6141
FANCL_C
Motif
Other DBs
NCBI-GeneID:
107769852
NCBI-ProteinID:
XP_016444594
UniProt:
A0A1S3XXJ5
LinkDB
All DBs
Position
16:complement(140649607..140672228)
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AA seq
938 aa
AA seq
DB search
MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGYLDHRRYPDFSLISKSGDFNNAL
SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEAEQF
SSEHITECMKKVTAVDLKQTVLVDRDFLIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNM
TPDRHLGAAQIDRLQLDLVITESTYATTFRDSKYAREREFLEAVHKCVASGGKVLIPTFA
LGRAQELCMLLDDYWERMNLKAPIYFAAGLTIQANLYYKVLINWTSQKVKSTAATRNAFD
FKNVHSFDRSMINAPGPCVLFATPGMISGGFSLEVFKQWAPCGQNLITLPGYCVAGTVGH
RLMSAKTPAKINVDENTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPK
MALLKKGIESDLGIPCYYPANNETVCIPSTLYVKADASREFLKSSLSPNFKFLNTSSRAD
IDLILNARTESFVQVCDDRVAEGVLTMQKNQHPKIVHQNELMVMVGGENHEVQFAYCCPV
RVSDDCKDNLTQTQIHQTIRKNITSLYYEFYVSDKPHFFSLKDKQLSTFSFKIMATEPPN
MISSDPTRVPLLSRREDTGGGARQSSLAVLLGRLTGGRGGGASTLVRETAARELDERRAD
WGYSKPVVALDMMWNLGFVIVSVVILSCTFDESPNVPIRIWVCGYALQCVVHVVLVWLEY
RRRNSQGENDNEENGEEGNGVLGIGNQSSVAKRCETVNTMASLLWWIVGFYWIVSGGDIL
LQNAPSLYWLAVAFLAFDVFFAVFCVALACLIGVALCCCLPCIIAVLYAVGQEGASEADL
KVLPKYRFHICKDEEKPSVGAGKMVPIETSSGYLANERILLPEDAECCICLSLYEDETEL
HALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgaatgtttagttttgggggcaggacaggaggtaggaaagagctgtgttgtg
gtgacaataaatggcaagaagataatgtttgattgtgggatgcatatggggtacctcgac
catcgcagatacccggatttctctctaatttctaagtctggagacttcaacaacgctctc
tcatgcatcatcatcacccatttccacttagaccatattggagctcttccatattttact
gaagtgtgtgggtataatggccccatatacatgacgtatccaacaaaagcgttggctcca
ttgatgctggaagattatcgcaaagtgatggttgatagaagaggagaggcggagcaattt
agttctgagcatattacagaatgcatgaagaaagttactgcggtggatctgaagcagact
gtgctggttgacagggactttctgattcgagcatactatgctggacatgttcttggtgct
gcaatgttttatgctaaagtgggtgatgctgctatagtatacactggagattataatatg
acacccgatagacatcttggagctgctcaaatcgatcggctgcagctggaccttgtcata
acagagtcaacttatgcaaccaccttccgtgattccaaatatgcccgggagcgggagttt
ctcgaagcagttcacaaatgtgttgctagtggaggaaaggtgctcatccctacatttgct
ctgggaagagctcaggaactctgtatgctattggatgactattgggagcgaatgaatctt
aaagctcctatttattttgccgcaggtttgactattcaagctaatttgtactacaaagtt
ctcataaactggaccagccaaaaggtgaaaagtactgccgcaacacgaaatgcatttgac
ttcaaaaatgtccacagtttcgatcgttccatgataaatgctcctggaccttgtgtttta
tttgctactccgggcatgataagtgggggattttcacttgaagttttcaagcaatgggct
ccgtgcggacagaacctcataacactcccaggatattgcgtagctgggacagtaggacac
aggttgatgtctgctaaaactcccgccaaaataaatgttgatgaaaatacccagattgat
gtgcgctgccagatccatcagctgtcttttagtccacatactgatgccaagggaatcatg
gatttggtcaaatttctatcacccaaacatgtaatacttgtgcatggcgaaaagcccaag
atggcattgctaaaaaagggaattgaatcagacttggggatcccgtgctattatcctgca
aataacgagactgtgtgcattccctcaactctctatgttaaagctgatgcatccagagaa
tttcttaaaagttctttgagcccaaatttcaagtttctaaacacaagttcaagagcagac
attgatttgattctgaatgcgagaaccgagtcttttgtgcaagtatgtgatgacagagta
gctgaaggggtgctaaccatgcagaaaaaccagcatcccaaaattgtgcaccagaatgag
ctaatggtcatggtaggaggagaaaatcatgaagttcagtttgcttactgttgtccagtg
cgtgtctctgatgactgtaaagataatctgacacaaacccaaattcatcaaactatcaga
aaaaatattacatcactttattatgaattctatgtttctgacaaaccgcacttcttctct
ctaaaagataaacaattatccactttcagctttaaaatcatggcaactgagccaccaaat
atgatatcttcagaccccacaagggtcccacttctcagccgacgagaggacaccggcggc
ggggcccgtcagtcatcgttggctgtacttcttggtcggctcaccggcggaaggggtggc
ggtgcgtcgacgctagtgagggagacggcggcgcgtgagctggacgagcgacgcgccgac
tggggttactcaaagccagtggtggcactggacatgatgtggaacttgggttttgttatt
gtctcggttgtgattttgtcctgcacgtttgatgagtcgcccaatgttccgattaggatt
tgggtttgtgggtatgctttgcagtgcgtggtgcatgtggtgctggtttggttggaatat
agaaggagaaattctcaaggagaaaatgataatgaggagaatggtgaagagggaaatggc
gttttgggtattggtaatcaatcaagtgttgctaaacgatgtgaaactgtgaatacaatg
gcgtcacttctttggtggatagttggattttattggatagtctctggtggtgatattctt
ttacagaatgctccaagtctatactggttggcagttgcatttttggcattcgatgtattc
tttgccgtcttttgtgttgctttggcatgtctgataggagttgctctttgttgctgcttg
ccttgcataattgcagtactctatgcagtgggccaggaaggtgcatcagaagcagacctc
aaagttctccccaagtatagattccatatctgcaaggatgaggagaaaccaagtgtagga
gctggtaagatggtaccaattgagacgagcagtggatacttggccaatgagcgtattctt
ttacctgaggatgcagaatgttgtatatgtcttagcttgtacgaggatgagacggaactc
catgctctcccctgtaatcatcatttccactccacctgcatagttaaatggcttaagatg
aacgcgacatgtccactgtgcaagtacaacatcctgaaggggaacgaacaagtttag
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