Nicotiana tabacum (common tobacco): 107769852
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Entry
107769852 CDS
T04643
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107769852
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
107769852
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
DBD_Tnp_Mut
Motif
Other DBs
NCBI-GeneID:
107769852
NCBI-ProteinID:
XP_016444594
UniProt:
A0A1S3XXJ5
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All DBs
Position
Un
AA seq
649 aa
AA seq
DB search
MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGYLDHRRYPDFSLISKSGDFNNAL
SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEAEQF
SSEHITECMKKVTAVDLKQTVLVDRDFLIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNM
TPDRHLGAAQIDRLQLDLVITESTYATTFRDSKYAREREFLEAVHKCVASGGKVLIPTFA
LGRAQELCMLLDDYWERMNLKAPIYFAAGLTIQANLYYKVLINWTSQKVKSTAATRNAFD
FKNVHSFDRSMINAPGPCVLFATPGMISGGFSLEVFKQWAPCGQNLITLPGYCVAGTVGH
RLMSAKTPAKINVDENTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPK
MALLKKGIESDLGIPCYYPANNETVCIPSTLYVKADASREFLKSSLSPNFKFLNTSSRAD
IDLILNARTESFVQVCDDRVAEGVLTMQKNQHPKIVHQNELMVMVGGENHEVQFAYCCPV
RVSDDCKDVALSPGENTPPVLDKCPWLHLLYTKLSNDFQDVTYQNDGDRLQIESVTVSLC
LKEKCPHRIHVSPDSTSETVNFCCVWSMVDEKLAWRVISIMKNLELKTR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgaatgtttagttttgggggcaggacaggaggtaggaaagagctgtgttgtg
gtgacaataaatggcaagaagataatgtttgattgtgggatgcatatggggtacctcgac
catcgcagatacccggatttctctctaatttctaagtctggagacttcaacaacgctctc
tcatgcatcatcatcacccatttccacttagaccatattggagctcttccatattttact
gaagtgtgtgggtataatggccccatatacatgacgtatccaacaaaagcgttggctcca
ttgatgctggaagattatcgcaaagtgatggttgatagaagaggagaggcggagcaattt
agttctgagcatattacagaatgcatgaagaaagttactgcggtggatctgaagcagact
gtgctggttgacagggactttctgattcgagcatactatgctggacatgttcttggtgct
gcaatgttttatgctaaagtgggtgatgctgctatagtatacactggagattataatatg
acacccgatagacatcttggagctgctcaaatcgatcggctgcagctggaccttgtcata
acagagtcaacttatgcaaccaccttccgtgattccaaatatgcccgggagcgggagttt
ctcgaagcagttcacaaatgtgttgctagtggaggaaaggtgctcatccctacatttgct
ctgggaagagctcaggaactctgtatgctattggatgactattgggagcgaatgaatctt
aaagctcctatttattttgccgcaggtttgactattcaagctaatttgtactacaaagtt
ctcataaactggaccagccaaaaggtgaaaagtactgccgcaacacgaaatgcatttgac
ttcaaaaatgtccacagtttcgatcgttccatgataaatgctcctggaccttgtgtttta
tttgctactccgggcatgataagtgggggattttcacttgaagttttcaagcaatgggct
ccgtgcggacagaacctcataacactcccaggatattgcgtagctgggacagtaggacac
aggttgatgtctgctaaaactcccgccaaaataaatgttgatgaaaatacccagattgat
gtgcgctgccagatccatcagctgtcttttagtccacatactgatgccaagggaatcatg
gatttggtcaaatttctatcacccaaacatgtaatacttgtgcatggcgaaaagcccaag
atggcattgctaaaaaagggaattgaatcagacttggggatcccgtgctattatcctgca
aataacgagactgtgtgcattccctcaactctctatgttaaagctgatgcatccagagaa
tttcttaaaagttctttgagcccaaatttcaagtttctaaacacaagttcaagagcagac
attgatttgattctgaatgcgagaaccgagtcttttgtgcaagtatgtgatgacagagta
gctgaaggggtgctaaccatgcagaaaaaccagcatcccaaaattgtgcaccagaatgag
ctaatggtcatggtaggaggagaaaatcatgaagttcagtttgcttactgttgtccagtg
cgtgtctctgatgactgtaaagatgtagctctgtcaccaggagaaaacacgcctcctgtg
cttgataaatgcccgtggctgcacttactatacacaaaactctcaaatgattttcaagat
gtaacctatcagaatgatggagaccgtctccagatagagtcagttactgtttctttgtgt
ctgaaggagaagtgtcctcatagaatacatgttagtcctgatagcacatctgaaacagta
aacttctgttgcgtgtggtcaatggtagatgagaaacttgcttggagggtcatttcaatc
atgaagaatttggagttgaagactcgttaa
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