Nicotiana tabacum (common tobacco): 107769880 Help Entry 107769880         CDS       T04643                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism nta  Nicotiana tabacum (common tobacco) Pathway nta04142   Lysosome biogenesis nta04148   Efferocytosis Brite KEGG Orthology (KO) [BR:nta00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     107769880    04148 Efferocytosis     107769880  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nta04131]     107769880 Membrane trafficking [BR:nta04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     107769880 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_WDR35 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  107769880 NCBI-ProteinID:  XP_075091366 UniProt:  A0AC58T2A9 LinkDB All DBs Position 17:147575846..147585708 Genome browser AA seq 1004 aa AA seqDB search MVHSAYDSFELLNNCPTKIDAIESYGSNLLIACSDGSLRVYGPESAVSDQSPPSDFHSQT LGLHQERYVLERSVNGFSRRQMLAMEVLVSRELLLSLSESIAFHRLPNLETLAVITKAKG ANVYSWDDKRGFLCFGRQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRR EYMILNTTNGALSEVFPSGRIAPPLVVSLPSGELLLGKDNIGVLVDQNGKLIQEGRVCWS EAPAAVVIQNPYAIGLLPRHVEIRSLRVPYPLIQTVVLRNVRRVVRSNNAVIVALDYSVF GFFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRTAKEQSIHIRYAHFLFENGSYE EAMEHFLASQVEITYVLALYPSIIVPKSSFIPEPQKFVDVADAPYLSRGSSGLSDDLDST PSIVLESDELDIESKKMSHNTLMGLIKYLQKKRYSVIEKATAEGTEEVVSDAVGDNFISY GTSRSKKPTKGRTHAPITSVARDMAAILDTALLQALLLTGQSSAATDFLKALNYCDVKIC QEFLQKRMQYACLLELYRSNSMHREALKLLHQLVEESKSEQIPLELSTKFKPDMIIEYLK PLCATDPMLVLEFSLPVLESCPMQTIELFLSGNIPADLVNSYLKQHAPNMQATYLELMLA MNENSISRNLQNEMVQIYLSEVLDLYAELNTQQKWDEKTYSPTRKKLLSALESISGYNPE VLLKRLPPDALYEERAVLLGKMNQHELALSIYVHKLHVPELALSYCDRVYDSGLQQHSAK SYGNIYLTLLQIYLNPTKTTKNFEKKITNLVSSQSPGIPKVGSGTTAKIKGGRSKKIAEI EGAEDIRFSPSGTDSGRSDGDMEDAAEEGDSTIMLDQVLDLLSRRWDRIHGAQALKLLPR DTKLQNLLPFLGPLLRKSSEAYRNFSVIKSLRESENLQVKDELYNQRKAVLKITSDSLCS LCNKKIGTSVFAVYPNGKTIVHFVCFRDSQNMKAVGRGSQMRKR NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagtgcctacgattccttcgaactcctcaataattgtcccacaaaaatcgat gccatcgaatcatacggctcaaatttactcatcgcctgttccgatggatcgctccgcgtt tacggtccggaatccgctgtttccgatcaatctccgccgtccgatttccactcccaaacc ttagggcttcatcaagagcgatacgtgcttgaaagaagtgtgaatggattctccagaaga caaatgctggctatggaagttctcgtatcgcgagaacttctgctttctctctcggagtcc atagcgttccatcggttgcccaatttggagactttggctgtgataactaaggctaaaggt gcaaatgtatactcatgggatgataaaagagggtttctttgcttcggcaggcaaaagaga gtttgtattttcagacatgacgggggaaggggatttgtggaggtgaaagaattcggggtc cctgacacagtcaagtcgatgtcatggtgtggtgagaatatttgcttggggattagaaga gagtacatgatattgaataccaccaatggtgcattgtctgaggtgtttccttcagggagg atcgccccacctcttgtggtgtctcttccctccggagaacttcttttgggaaaggataat attggtgtcttagttgaccaaaatggcaagttgattcaagaggggagggtttgttggtcc gaggctcctgcagctgttgttattcagaatccctatgcaataggtctcttaccacggcat gttgagatacgttctcttcgtgttccttatcctttaattcaaacagttgtccttcggaat gttcgccgtgttgttcgaagcaacaatgctgttattgttgctcttgattattctgttttt ggcttttttcctgttcctctgggtgcacagattgtgcaactaacagcatctggaaacttt gaggaagccttggctttgtgcaaattgctaccaccagaagattcaagtcttagaactgca aaggagcaatcaattcatataagatatgcgcactttctatttgaaaatgggagctatgaa gaagcaatggaacattttctggcatctcaagttgaaatcacttatgtgctcgccttatat ccatcaattattgttccgaaatcatctttcatacctgaaccacagaaatttgttgatgtc gcggatgcaccatatctctcccgaggttcctctggtctatcagatgatctggactcgacg ccttcgattgtcttagaatctgatgaattggatatagaatccaagaaaatgagtcataac actttgatgggtctgattaagtatttgcagaagaagagatatagtgtcattgagaaagcc acagctgagggaactgaggaggtggtttcagatgctgtaggagataatttcatttcctat ggaactagccggtccaaaaaaccaaccaagggaagaacccatgctccaatcacttccgtc gctagggatatggctgctattctggacactgcacttcttcaagctctacttttaactgga cagtcctcagctgctacagattttctgaaagccctcaactattgtgatgtgaaaatatgc caggagttcctgcagaaaagaatgcagtatgcttgtctgctagaactttatagaagcaac tcaatgcatcgtgaagcactgaaacttctccatcaattggtagaagagtcgaagtcagag caaattcctttagagctttcaacgaaattcaagcctgatatgatcattgaatatctcaaa cccctttgtgcaacagaccccatgcttgtcctggagttctcactgcctgttcttgaaagc tgtcctatgcaaaccattgagctattcttgtctggtaacattccagcagacttggtgaac tcttacttaaaacagcatgctccaaacatgcaggcgacatatctggaactcatgcttgcc atgaatgaaaatagcatctccaggaatctgcagaatgaaatggtgcaaatttatctctcg gaagtgcttgatttgtatgctgaacttaacacccagcaaaagtgggatgagaaaacatat tctccgacaaggaaaaagctattgtctgctttggagagtatctctggatataacccagag gtgctgctgaagagacttccaccagatgctttgtatgaagaacgagcagttctgttgggg aaaatgaatcaacatgaacttgcgttgtctatttatgtgcacaagcttcacgttcctgaa cttgcactgtcctattgtgatcgggtgtatgattcaggacttcaacaacattcagcaaaa tcatatggaaacatttacctgactctactgcaaatctatctaaatcctacgaagacaacg aaaaattttgagaagaaaattactaatctggtatcatctcagagccctgggattccaaaa gttggttcaggaactacagcaaagataaaaggaggccgctccaagaaaattgctgaaatt gagggcgctgaggacattcgattcagtccaagtggcactgacagtggtaggagtgatgga gatatggaagatgctgctgaggaaggagattctactattatgctagatcaagttcttgat cttttgagcagaaggtgggatcggatccatggggcccaagctctgaaactactgccaagg gatacgaagctacagaatttgcttccatttcttggacctcttctgaggaaatccagtgaa gcgtatcggaacttttctgtgataaaaagcttgagagaaagtgaaaacctacaggtcaaa gatgaactgtataaccaaagaaaggcagtcttgaagatcacaagtgatagcttgtgttct ctctgcaacaagaagatcggcaccagtgtctttgcagtctatcctaatggcaagacaatt gtgcactttgtttgctttagagattcacagaatatgaaggcagttggaagaggctctcag atgaggaaaagatga

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