Nicotiana tabacum (common tobacco): 107770857
Help
Entry
107770857 CDS
T04643
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107770857
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107770857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF3737
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
107770857
NCBI-ProteinID:
XP_016445678
UniProt:
A0A1S3Y0F1
LinkDB
All DBs
Position
Un
AA seq
405 aa
AA seq
DB search
MVCWRTPDRAFIFLICITPFILDRSLAAVFDITSYGAVGDGKHDDTQAFKQAWAAACRGD
SRNPSMFIPSGKSFLIRPITFQGPCKSSNIHLQVSGSIVAPEDPKEWKGCENVSWIYFTG
VFGLFINGSGTINGNGQRWWKTHSGIRVNGTCTKPTAVHFNYCNGLQLSGIKLVNSSRNH
ISLTYSKGVTISKIHISAPKYSRNTDGIDISNSSQLHIQDSTIQTGDDCIAINTGCVDVH
ISGISCGPGHGISVGSLGPDNTYAYVDNVYVTNCNLEGTQNGVRIKTWQGGSGYARSIHF
EDIHLKNVENPIIIDQFYCNGGHSCQPQVSAVKISDITYKNIHGSTSSKAAINLNCSNST
ACTNIEMENINITPVVPGQKIFAICNNAKGKASSTSPPVPCLDKY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtttgttggcgtactccggatcgagctttcatctttttgatctgtattactccattt
attcttgatagaagtcttgctgctgtttttgatataacaagttatggcgctgttggagat
ggaaagcacgacgacactcaagcattcaaacaagcttgggcagctgcgtgtaggggtgac
agtagaaatccgtcaatgtttataccaagtgggaagtcatttttaatacgaccaattaca
ttccaaggaccttgcaaatcctccaatattcatctacaagtatcaggatcaattgtagca
ccagaggatccaaaggaatggaaaggttgtgaaaatgttagttggatatattttacaggt
gtttttggtctcttcatcaatggttctggtactatcaatggcaatggtcaacgttggtgg
aaaactcatagtggtatcagggtgaacggaacttgcactaaaccaacagctgtccacttt
aattattgtaacggccttcaattgagtggaattaagctagtgaatagttcgagaaatcat
ataagcctgacttacagcaaaggagtaaccatctcaaaaattcatattagtgcaccaaaa
tatagtcgcaatactgatggtattgatatctctaactctagccaacttcacattcaagac
tccactattcagacaggtgatgactgcattgccatcaatactgggtgcgttgatgttcat
atttctggtatttcatgtggaccagggcatggtataagtgtgggaagcttaggtccagat
aacacatatgcgtatgttgacaacgtctatgtaacaaattgtaaccttgagggaacccag
aatggtgttagaattaagacatggcagggtggttctgggtatgctaggtctatacatttt
gaagatattcacctcaaaaatgtagaaaaccccatcattattgatcagttttattgcaat
ggaggtcattcatgtcaacctcaggtaagtgcagtgaaaataagcgatataacatacaag
aatatacatggaagtacaagcagcaaagcagcaataaatttgaactgtagcaatagcaca
gcttgcaccaacattgagatggagaatatcaacataactccagttgtccctggacaaaag
atttttgctatttgcaataatgccaaaggaaaagcctcttcaacttcacctcctgtacct
tgtttggataaatattag
DBGET
integrated database retrieval system
