Nicotiana tabacum (common tobacco): 107771103
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Entry
107771103 CDS
T04643
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107771103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107771103
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107771103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
TraH
Motif
Other DBs
NCBI-GeneID:
107771103
NCBI-ProteinID:
XP_016445912
UniProt:
A0A1S3Y1N9
LinkDB
All DBs
Position
Un
AA seq
790 aa
AA seq
DB search
MIPNGVEDEEKFLAAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEIFFKEETKRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APARDILKDLVEMCRGIQHPLRGLFLRSYLSQVSKDKLPDIGSEYEGDAETVVDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGIDLEMYKETVLP
RILEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLGACPQLQPSVDIKMVLARLME
RLSNYAALSTDVLPEFFQVEAFAKLNNAIGKVIEAQEDMPIAGVVTLYSSLLTFTLHVHP
DRLDYVDQILGACVKKLSGKGKLKDSKATKQIVALLSAPLEKYKDIDTALKLSNYPHVME
HLDDATSKEMANVLVQTILKSKTCISTAEKVEALFELMKGLIRDLDENLHDELDEEDFKE
EQNSVARLIQMLHNDDPEEMLKIISTVKKHILTGGPKRLPFTVPPLIFNSLKLVRRLQNQ
DENAPEEEASAMPKKIFQILNLIIEALSSVPVPELSLRLYLECAEAANDADLEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
KAVYSCSHLFWVDDQDNIKDGERVLLCLKRALRIANAAQQMSNATRGSSGSVLLFIEILN
KYLYFFEKGVTQITVASIQSLIELITTEMQSENTTSDPAADAFLASTLRYIQFQKDKGGA
VGEKYESIKS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatccctaacggagttgaagatgaagagaaatttctagcagctggaatcgccggcctt
caacagaacgctttctacatgcatcgcgctcttgattcgaataatctgaaagatgcactc
aaatactcagctcagatgctatcggagctccgaacttcaaggctttcccctcacaaatac
tacgagctatatatgcgggcatttgatgaattgagaaagctagaaattttctttaaggag
gagacgaagcggggttgctcgattgttgagttgtatgaactcgtgcagcatgctggcaat
attttgcctagactgtatctactatgcacagtggggtctgtgtacatcaaatccaaggag
gcgcctgccagggatattcttaaagatctggttgaaatgtgccgtggtatacaacatcct
ttgcgcggactcttcctgaggagttatctttctcaagtcagcaaggataaattacctgat
ataggttctgagtatgaaggggatgctgaaactgttgtggatgctgtagagtttgttctc
caaaatttcacggaaatgaacaaactctgggttagaatgcaacatcagggacctgctcgc
gaaaaggagaaacgagaaaaagaaaggagcgagcttcgtgatctcgttgggaagaacctg
catgttctcagtcaaatagaaggaatcgacctggagatgtacaaagagactgtgcttcca
agaattttagagcaggttgtcaactgtaaagatgagattgcacagggctatttgatggat
tgcataattcaagtcttccctgatgaatatcacttacaaactcttgaaacattattgggt
gcttgtccccagcttcagccatctgttgatatcaagatggtgcttgctcggctgatggaa
aggctctcaaactatgctgctttaagtacagatgttttaccagagtttttccaagtggaa
gcttttgcaaaactaaataatgccatagggaaggtgatagaagcacaagaagacatgcct
attgctggagttgtgactttatattcatctcttctaacttttactcttcatgtacaccct
gatcgtcttgattatgtggatcagatcttgggtgcatgtgttaagaaactttctggtaaa
ggaaagctcaaagacagtaaagcaacaaaacagattgtggctcttttaagtgctcccctg
gagaagtataaggatattgatactgcattaaagctgtcaaattatcctcatgttatggag
caccttgatgatgcaactagtaaagagatggctaatgttttagttcaaactattttaaaa
agtaagacttgcatttcgacagctgaaaaggtagaggcactttttgaattaatgaaagga
cttatcagggatttggatgagaatcttcatgatgagcttgacgaagaagatttcaaggaa
gagcagaactctgttgcacggcttattcaaatgcttcacaatgacgaccctgaagagatg
ctgaagataatttctactgtgaagaagcatattctgacaggaggaccgaagaggcttccc
tttactgtccctccccttattttcaattctcttaagttggttaggcgactgcagaaccaa
gatgaaaatgctccagaggaagaggcatctgctatgcctaagaaaatttttcagatttta
aatctgataattgaggctctctcaagtgttccagtacctgaactatcattgaggttgtac
ttggagtgtgctgaggctgccaatgacgctgacctagagcctgttgcctacgaatttttc
acccaagcttatatactatacgaagaagaaatttcggactccaaagctcaggtgactgca
atacacttaattataggaactcttcagagaatgcacgtctttggtgttgagaacagggac
acattaacacacaaggccacggggtactcggcaaaactcctgaagaagcctgatcagtgc
aaggctgtctactcctgttcgcatcttttctgggttgatgatcaggacaacatcaaggat
ggagagagggttttgctttgcttaaaacgggctttaagaattgcgaatgccgctcaacaa
atgtccaatgcaacccgaggcagcagtggatcggtcttgctctttatagaaattctaaac
aagtatttatatttctttgagaagggggtgacacagatcactgttgcatccatccaaagc
ctaattgagctaataacaactgaaatgcaaagtgaaaatacaacttcggatcctgctgca
gatgctttccttgcaagcacattacgatatatccagttccagaaggataaaggtggagca
gttggtgagaaatatgaatccatcaagtcttag
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