Nicotiana tabacum (common tobacco): 107771488
Help
Entry
107771488 CDS
T04643
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nta04812
]
107771488
Cytoskeleton proteins [BR:
nta04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107771488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
PROPPIN
VPS8_N
WS_DGAT_cat
Motif
Other DBs
NCBI-GeneID:
107771488
NCBI-ProteinID:
XP_016446336
UniProt:
A0A1S3Y2I3
LinkDB
All DBs
Position
Un
AA seq
798 aa
AA seq
DB search
MTTTKRAYKLQEFVAHSLSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHSRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCMTFNPDG
RTLLCGLHESLKVCSWEPIRCHDTVDVGWSRLSDLNIHEEKLLGCSYNQSCVGVWVVDIS
RLEPYAMGNTARLNGHPDVKSNSGGNLSNLADDGTKASSGRLLISQNCDPVKETKSFGRL
SVSQNLELQRDSRTLTTTANAPGTPQRINLSVGAKAPPINTTAFPNTTGLKRNSAKAQSA
AANSSIVNRSEVIPIIVPRNNDRMEQVSEPRKGVVATRAMQQSLQTKVSDSRRFSTFKED
LGRPNAVSQFDIEVPKAIEFSSTADKSNFPSVIAGAAATEKNVKDDKSLVSAKLETHSAP
ELFSGNQNENYETRGNVISRSAYPMEGQRRARTRSVVANWEKRDRIPSHEGLASNTVVGI
VPALNMLSTNLRGHPSSAESVTVSATDEDTITDLLEQHDQFVGLMQSRLAKLQVVYQCWQ
RHDIKGALSAMEKMADTAVLADVISFLTEKNDIITLEICTCLLPLLVGMLESSLDRHQDI
SLNMLLKLVKVFGSVIYSSLSAPASVGVDIEAEQRMDRYNLCFLELEKVKHWLPTLTRRG
GSIAKSAQELSLALQDVS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgactactactaagcgtgcttataagctacaggaattcgtagcacattctttaagcgtg
aactgcttgaagattggacgcaagtcatccagggttcttgtaaccggaggagaagatcac
aaggttaacctttgggccattggcaagcccaatgccatcttgagtttgtcaggtcattca
agcggaattgattcagttagctttgattcttcagaggtgttggtagctgcaggagcagca
agtggtactatcaagctttgggatttagaggaggccaagattgttcgcacactcactgga
caccgatccaactgcatatcgttggacttccatccctttggcgagttctttgcatctggg
tctctagatacaaacctaaagatatgggatatcagacgcaaaggatgtatccacacatac
aaaggtcacagtagaggtgtcaatgccatcaggttcactccagatggccgatgggttgta
tctggtggggaagacaatactgtcaagctttgggatttgactgcaggaaagcttttacac
gatttcaaatgtcacgaagggcagattcagtgcatagactttcatccccatgagtttcta
ctggcaacaggttctgccgacagaactgtaaaattctgggacctcgaaacctttgagctc
ataggttcagctggacctgagacatcaggggtgcgttgtatgaccttcaaccctgatggg
agaacccttctctgtggtttgcatgagagtttgaaggtatgctcttgggaaccaattaga
tgtcacgatacagtagatgttggatggtctcggctgtcggatcttaatattcatgaagag
aaactccttggctgctcttacaatcaaagttgtgttggagtgtgggttgtggatatttcg
cgtcttgaaccatatgcaatgggtaatactgctcgattaaatggtcaccctgatgtaaaa
tcgaattcgggtgggaatttatccaatctggcggatgatggtaccaaagccagttctggt
agactcttgatttctcaaaattgtgatcctgttaaagagaccaaatcttttggaagactt
tcagtatcacaaaacttggagcttcaaagagattctaggacccttactactactgcaaat
gcgcctggcactcctcaaagaataaatctgagtgttggtgcgaaagcacctccaattaac
accacagcatttcctaatacaactggtctgaagaggaattcagctaaagcccaatcagca
gcagctaattcttccattgtcaataggtcagaggtcatacccattattgttccaagaaat
aatgacagaatggagcaagtatctgaacccaggaaaggagtagttgcaacaagggcaatg
cagcagtcattgcagacaaaagtctctgattcacggaggttttcaactttcaaggaagac
cttgggagaccaaatgctgtgtcacagtttgacattgaagtccccaaggctattgaattc
agtagtacagcagacaagagcaatttcccttcagtaattgctggagctgcagcaactgag
aagaatgtgaaggatgacaagagtctggtctcagcaaaacttgaaacgcattcagcacct
gagttattttccggaaaccaaaatgaaaattatgaaacacgtggaaatgttattagtagg
agtgcttatcccatggaaggtcaaagaagagcaaggacacggtctgttgttgcaaattgg
gagaagagagacaggatcccatctcacgagggtcttgcttccaacactgttgttgggata
gtacctgctctgaatatgctttccaccaacttgagagggcatccttcatcagctgaaagt
gtaacagtttctgctacagatgaggataccatcactgacttgttggaacagcatgaccaa
tttgttggcttaatgcaatctcgtttggccaaattacaggttgtctatcagtgctggcaa
aggcatgacattaaaggggcacttagtgcaatggagaagatggcagatactgctgtgctt
gctgatgtaattagctttttaacagagaaaaatgatattattacattagagatttgcaca
tgccttctaccactccttgtgggaatgcttgagagcagcttggataggcatcaggatatt
tcactgaatatgctgctcaaacttgttaaagtatttggttcagtgatttattcttcattg
tctgcgccagcatcagttggtgttgatatcgaggcagagcaaaggatggatcgctacaat
ctttgctttcttgagcttgaaaaagtcaaacattggctgcccactcttacaagaagggga
gggtccattgccaagtccgcacaagagctgagtctagcacttcaagatgtttcgtga
DBGET
integrated database retrieval system
