KEGG   Nicotiana tabacum (common tobacco): 107771813
Entry
107771813         CDS       T04643                                 
Name
(RefSeq) autophagy-related protein 16-like
  KO
K17890  autophagy-related protein 16-1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:nta00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    107771813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107771813
   03029 Mitochondrial biogenesis [BR:nta03029]
    107771813
Membrane trafficking [BR:nta04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    107771813
 Others
  Specific organelles associated proteins
   Auto phagosome
    107771813
Mitochondrial biogenesis [BR:nta03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107771813
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ATG16 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 WDR54 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_VPS8 Cytochrom_D1 eIF2A PROPPIN Ge1_WD40 WD40_RFWD3 Beta-prop_Vps41 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 107771813
NCBI-ProteinID: XP_016446741
UniProt: A0A1S3Y3M9
LinkDB
Position
Un
AA seq 509 aa
MSYEEVAVGAIRDALKALRKRHLVEEGAHAPAFLALTRPLVLQGSEWKEKAENLEVELQQ
CYKAQARLSEQLVVEVAESRASKSLVQEKESIITDLQIELNQSRDECSRLTEILTEKTKA
LELLMGEHQDLKAQLEAMTLRANNAEAENKTLVDRWMLQKMQDAERLNEANALYEDMLDK
VKATSIEKLARQQVDGVVRQSEDGADFYAESSLPSICKQRIPAHDGGCAAILFEYNSSKL
ISSGQDRAIKMWDTTSGSLSNSLYGSLGSVLDLSITHDNKLIIAASSSNNLYVWDANSGR
IRHTLTGHIDKVCAVDVSKFSSRYVVSAAYDRTIKVWDLQKGYCTNTIIFHSNCNSLSFS
MDGLTICSGHVDGSLRLWDIQTGKLLSEVAAHSQAITSVSVSRNGNVILTSGRDNVHNLF
DIRTLEICGTFRANENRVASNWSRSCISPDDSYVAAGSVDGSVHIWSVSNARMVSTLKEH
TAPVLCCSWSGLGKPLATSDKSGIICIWS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcatacgaagaagttgctgttggagcaattagggatgctttaaaggctctaagaaag
cggcatttagtggaggaaggggctcatgcccctgctttccttgccctcacgaggcctctc
gttttgcagggttcagagtggaaagagaaagctgaaaatcttgaagtggaacttcagcaa
tgttacaaagctcaagcacgactgtcggagcagcttgtggtggaagtagctgaatctaga
gcatcaaaatctttagttcaagagaaggaaagtatcattactgaccttcagatcgagcta
aaccaatcaagggatgaatgttctcgtttaactgaaattctcactgaaaagactaaagct
ttggagttgcttatgggtgagcaccaggaccttaaagcacaacttgaagcaatgactctg
agagcaaacaatgctgaggcagaaaataaaacgctggttgatcgctggatgctgcagaag
atgcaggatgcggagcgccttaacgaggctaatgctctctatgaagatatgctggataag
gtcaaggccaccagtatagagaaacttgctcgtcaacaagtagatggtgtggtccgccaa
agtgaagatggtgcagacttttatgcggagtcttcccttcctagtatatgcaagcaaaga
atccccgcccatgatggtggatgtgccgcgattctttttgagtacaactccagtaaattg
ataagcagtgggcaggacagggcaattaaaatgtgggatactacaagtggatcattaagc
aacagtctttatggttccctgggttctgtccttgatctttccattacacatgataacaaa
ctcatcatagcagcaagtagttcaaataacttgtatgtgtgggatgcaaattcaggcagg
atacgacatactcttactgggcatatagacaaagtttgtgctgtagatgtgagcaaattt
tcaagtcgctatgtggtgagtgctgcatatgatcgtaccataaaagtttgggatctgcag
aagggttactgtactaacactattatcttccacagtaactgtaacagcctttcgtttagc
atggatggcctgaccatttgttccggtcatgtagatgggagtcttagattatgggatatt
cagacagggaagcttctgagtgaagttgctgcacattcacaggctattacatcagtttca
gtctctcgaaatggaaatgtaatattaaccagcgggagagacaacgtgcacaatctcttt
gatattcgtacccttgaaatttgtggcactttcagagcgaatgagaaccgagttgcatct
aattggagtcgatcctgtatcagtccagatgatagttatgttgctgctggttctgttgat
ggatctgttcatatttggtcagtatcaaacgctagaatggtaagcactttgaaagaacac
acagcccctgttctatgttgttcatggagtggtcttggtaaacctctggctacctcggat
aagagtggaatcatatgtatttggtcatag

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