KEGG   Nicotiana tabacum (common tobacco): 107771978
Entry
107771978         CDS       T04643                                 
Name
(RefSeq) splicing factor U2af large subunit B-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107771978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107771978
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107771978
 Complex B
    107771978
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded RRM_PARP14_3
Other DBs
NCBI-GeneID: 107771978
NCBI-ProteinID: XP_016446931
UniProt: A0A1S3Y455
LinkDB
Position
Un
AA seq 602 aa
MDSHENGRSQLTPSRTGGENETAGVDNGEEERRRRSSSKHSSRDYENERESSRSRDRERD
KGHDKDRDRSRDKERDREKDRDRRHRDRSERRRTRDRDDDATISDGPEGQEYWQKDYDRD
RDERYRHRSKSFEREREEGHRHRSKSYDKDREERDRHRSKSYDKDREERRGHRSHSRGKS
GHRSRSRSRSRSRSKSKRISGFDMAPPTSALLPSAPAVTDAPAGQLPATAPAIPGIFPNM
FPLASAQLGAIPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATYFNHVMSAIGGNTA
GPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATL
GPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNLV
KDKETGNSKGYAFCVYSDVSVTDIACAALNGIKMGDKTLTVRRASQGTLQPKPEQESILM
HAQQQIALQRLMLQPGGPPTKVLCLTNVVSADELKDDEDYEDIVEDMRTECGKFGNLVNL
AIPRPRPDGEPTPGVGKVFLEYTDVEGSSRAQQGLNGRKFGGNPVVAVFYSENKFSEGDY
EG
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggactcccatgaaaatgggcgcagtcagctcacgcctagtcgtactggtggtgagaac
gaaacagccggtgtggataatggagaagaagagaggaggagaagatcaagctctaagcac
agctcccgtgattatgaaaatgaaagggagtcgtcaagaagcagggacagggagagggac
aaaggacatgataaggatagagataggagcagagacaaggaaagggatcgcgaaaaagat
cgtgatcgtcgccacagagatcgaagtgagaggcgtaggactagagatagagatgatgat
gctaccatttctgatggtcctgagggccaggaatactggcagaaagattatgatagagat
agagatgagaggtatagacataggtcaaaatcttttgagagagagcgagaggaaggtcat
agacacaggtccaaatcgtacgacaaggatagagaggaaagagatagacacaggtcaaaa
tcctatgacaaggatagagaggaaaggcgtggacacagatctcactcaaggggaaaatct
ggtcatagatcaagatcacgttctcgctctcgttcacgctccaaaagcaaaaggatcagc
gggtttgacatggcacctcctacttctgctctgttacctagtgctcctgctgttacagat
gctcctgcaggtcaacttcctgccactgccccagctattccaggaatttttcctaacatg
ttccctttggcatctgcacagcttggagctattcccgttatgccagtccaggcaatgact
cagcaggcaactagacatgcaaggcgagtttatgtgggtggacttcctccgagtgcaaat
gaacagtcagtggctacctactttaatcatgttatgtcggcaattggtggaaacactgct
ggtccaggagatgctgttgttaatgtttatataaaccatgagaaaaagtttgctttcgtt
gagatgagatccgtggaggaggccagcaatgccatggccttagatggcattatctttgag
ggaacacaagtaaaagttagaagaccaactgattataacccctccctggctgcaacactt
ggtccgagccaaccgaatccaaaccttaaccttgctgcagtgggattatcaccaggatcc
actggtgggcttgaaggtcctgaccgtatttttgtgggaggcctgccatactatttcact
gaagctcagattagggagttgcttgagtcctttggccctcttcgggggtttaatctggtc
aaagataaagaaactggaaactcgaaaggctatgccttttgtgtttactctgacgtgtcg
gttacagatattgcatgtgcagctcttaatgggattaagatgggtgataaaactcttact
gtcagacgtgcaagtcaaggtactttacagcctaagccagagcaggagagtatattaatg
catgctcagcaacaaatagcactgcagagactcatgctacaacctggtggacctccgact
aaagtcttatgcctaacaaatgtggttagcgcggatgagctcaaagatgatgaagactat
gaagatatagtggaagatatgagaactgaatgcgggaaatttggtaatttagtgaattta
gccatcccacgcccaaggcctgacggtgaaccgacaccaggggttggaaaggtctttttg
gagtacacggatgtggagggttcctcgagagctcaacaaggattgaatggcagaaaattt
ggaggaaacccagttgttgctgtcttttattcggagaacaagttctctgagggggactac
gagggctag

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