Nicotiana tabacum (common tobacco): 107772036
Help
Entry
107772036 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107772036
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107772036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
DUF3587
Motif
Other DBs
NCBI-GeneID:
107772036
NCBI-ProteinID:
XP_075103249
UniProt:
A0AC58U1J6
LinkDB
All DBs
Position
24:106133712..106142643
Genome browser
AA seq
443 aa
AA seq
DB search
MTEPSKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF
YSNVQPSIRGRNVYVQFSSHQELTTMDQNSQGRGDEPNRILLVTIHHVLYPITVEVLHQV
FSPHGVVEKIVTFQKSAGFQALIQYQLPQNAVSARNSLQGRNIYDGCCQLDVQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSPQGYGDAGGMYSLQGSGPRGVGFPQMGNAAAIAAA
FPGGLPPGISGTNDRCTVIVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQM
GDGFQAELAVHFLKGAMLFGTRLEVNYSKHPNIITGPDTHDYSNSNLNRFNRNAAKNYRY
CCSPTKMIHLSSLPQDVTEEEIVAHKEEHGTIVGTKLFEMNGKKQALVLFENEEQATEAL
VCKHATSLGGSIIRISFSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccttcaaaggtcattcacattcgcaatgtgggccatgagatctctgagaat
gacttgcttcagctatttcagccctttggcgtcattaccaaacttgtaatgcttcgggca
aaaaatcaggctctcttgcaaatgcaagacgttccatctgctgtaaatgcattacagttc
tattcaaatgttcaacccagcatcaggggaagaaatgtttatgtacaattttcatctcat
caagaactgacaaccatggatcagaactcccaagggcgaggagatgagccaaatcgaatt
ctcttagttacgatacatcatgtgctatatcctataactgtggaagtgctgcatcaagtg
ttttcacctcatggagttgttgaaaagatcgtgacatttcagaagtcggctggttttcaa
gctttgattcaataccaattaccccaaaatgctgtttctgctaggaactctctccagggg
cgtaatatatatgatggttgctgtcagcttgatgtacaattctcaaacctagacgaattg
caagtgaactacaataatgaacgctcgagggacttcaccaacccaaatctaccatcagaa
cagaagggcaaatctcctcagggatatggagacgcaggaggcatgtactccttgcaaggt
tccgggcctcgtggagttggatttcctcagatgggaaatgctgcagcaattgcagctgcc
tttcctggtggtttgcctcctggcataagcgggacaaatgacaggtgtactgttattgta
tctaatttaaatccagatagaatagacgaagacaagctttttaatctgttctccatttat
ggaaacattgtcagaattaaactcctacggaataaaccagatcacgctctggttcagatg
ggtgatggtttccaggcagagctagccgtgcactttttgaagggtgccatgctatttggt
acgcggttggaagtcaactattcaaagcacccaaatattatcactggaccagatacacat
gactactcaaactcaaatctcaatcgttttaaccggaatgctgccaaaaactaccggtat
tgttgctcccctaccaaaatgatccacctgtcaagcctgccccaggatgtgacagaggaa
gagatcgtggcccacaaggaggagcatggtaccattgtcggtacaaagctttttgaaatg
aatgggaagaagcaggctcttgttctttttgaaaatgaggagcaggcaactgaggcattg
gtgtgcaaacatgctacctcccttggcggctcgatcattcggatttccttttctcagtta
caaaacatctga
DBGET
integrated database retrieval system
