Nicotiana tabacum (common tobacco): 107772855
Help
Entry
107772855 CDS
T04643
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107772855
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107772855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107772855
NCBI-ProteinID:
XP_016447805
UniProt:
A0A1S3Y6P6
LinkDB
All DBs
Position
Un
AA seq
299 aa
AA seq
DB search
MGFGSKATGGKAGRFYVVNDPSDDYTDPKPGTLRHAVIQKEPLWIIFDRGMTIRLHQELI
MQSDKTIDARGANVHISGGAGIMIQYTKNVIIHGLHIHDIVQGNGGMVRDAVDHIGLRTM
SDGDGISIFGASNIWIDHVSMWNCYDGIIDAVEGSTGITISNGHFTDHNEVMLFGASDSS
SIDQQMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSKNPTIISQGNR
FIAPPDIFKKQITKREYSPESVWMQWTWRSEGDLYMNGAYFVQSGDPDWSKKHQNLYDG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggctttggatccaaggccactggcggaaaggccggcaggttctatgtcgtcaatgat
ccttcagatgattataccgacccaaaaccaggaaccctacgtcatgctgttattcaaaag
gagccattgtggatcatatttgacagaggaatgacaattaggctacaccaggagttgatc
atgcagagtgataaaactatcgatgctcgtggggctaacgttcacatttctggtggcgct
ggtatcatgatccagtatacaaaaaacgtgattatccatggcctacacattcatgacatt
gtccaaggaaatggtggaatggttagagatgcagtggaccatattggactacgcacaatg
agtgatggagatggcatttccatatttggtgcgtccaatatttggattgatcatgtgtcg
atgtggaattgctatgatggaattattgatgctgttgaaggatccactggtatcaccata
tctaacggccatttcacagatcataatgaggtgatgttgtttggtgcaagtgatagttct
tcaatagatcaacaaatgcaaattacactagcattcaatcattttggaaagagattggtg
cagagaatgcccaggtgcagatggggatacattcatgttgttaataatgattatactcac
tggaatatgtatgctattggtggtagtaaaaatcctaccattattagccagggtaatcgt
ttcattgctcctcctgacatcttcaagaagcagattacaaagagggaatactctccagaa
tcagtgtggatgcagtggacatggagatcagagggagatttatacatgaatggggcatat
tttgttcaatctggtgatcctgattggtcaaagaaacatcaaaatctttacgatgga
DBGET
integrated database retrieval system