Nicotiana tabacum (common tobacco): 107773111
Help
Entry
107773111 CDS
T04643
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107773111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107773111
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107773111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_10
TPR_8
DUF627
Motif
Other DBs
NCBI-GeneID:
107773111
NCBI-ProteinID:
XP_016448045
UniProt:
A0A1S3Y793
LinkDB
All DBs
Position
Un
AA seq
864 aa
AA seq
DB search
MDTTSLAISRDAAPSSTTSSAAEDDGALSVNSGLAKEAALLFQSGKFADCCRVLHQLLQK
KERDPKVLHNIAIAENFQDGCSNPKKLIDELNNAKKRSEELARAASDQAEPANNVGTKAV
TGVNGSNSAPRELSSQQSSTLVYADEFDPSVTMYNLAVCWFHLHEHAKAFSILEGLFQNI
EPIDEEIAKRICLLLLDVALLTQNAARSADVISYVEKVFCSSSLLGQVDNGNSAQPTASS
IVVKSASFPSNSTIPDSSNPDSPAAGITSDGSLSRTLSEEGLEDDALHLISSMEIGGQNL
PRQSGLKSKNDSIRSQTDESISTADMRIKLHLCKVRFLLLTRNLKAAKREVKMAMNTARA
KDHSMALYLKSQLEYARGNHRKAIKLLMASSNRTEMGISSIYYNNLGCIYYRLGKHHTSS
VLFAKALSNSSSLRKEQPLKLSTISQDKSLLITYNCGVQYLACGKPLQAASCFYKATQVF
YNRPLLWLRIAECCLMALEKGLLKASGTAASDRSEVKVHVVGKGKWRQLVMEDGILRNGQ
ESLSGAEDLVVNDRQPKLSVLLARQCLLNALHLLNCSESKGHKSMQPRASGLEESETGEA
VPSKSANSKNGSTGDPKALNVAASGQINANGEVKEQKGVSSQHASLSSSICEYEAIGRKE
NLMIEQAVLADLAFVELELGNPLRALTIAKSLLKVQECSKIYIFLGNVYAAEALCLLNRP
KEAVEHLSTYIAGSKCVDLPFSQEDSEMWRQEKTLDFEDTNGGSATLNSFPPEESQAFVF
LKPEEARGMLFANLAAMSVMQGDIEQAQNYAVQALSTKPQRPEAILTAVYVDLLRGRSQE
ALTKLKHCSRIRFLPGSPTLNGSS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggatacgacgtcgttagcaattagcagagatgctgctccgtcttcgacgacgtcctcc
gcggcggaggacgatggcgcactctccgtcaactcaggacttgcgaaggaggctgcgttg
ctgttccagtcggggaaatttgccgattgttgtagagttttgcatcaactgttgcagaaa
aaggaacgcgatcctaaagttctacataacattgccattgctgagaactttcaagatggt
tgctccaatcctaagaagctgattgatgaacttaataatgctaagaaaagaagtgaagag
cttgctcgtgctgctagcgaccaggcagagcctgctaacaatgttggaaccaaagctgtg
acaggagttaatggaagtaacagtgcaccacgggagctatcttctcaacagagttccaca
cttgtttacgctgatgagtttgacccctcagtgaccatgtacaatctagcagtttgctgg
tttcatttgcatgaacatgcaaaagcattttcaattttggaaggattgtttcagaacatt
gaaccaatcgacgaggaaatagccaagcgcatttgcctcttattgttggatgttgcatta
cttactcaaaatgcagcaagatcggcggatgtgatcagttatgtggagaaggtcttttgt
agcagtagtttattaggtcaagttgacaacggaaactctgcacagccaacagcttcatcc
atcgtggtgaaatcggcttcatttcctagcaattcaactattcctgattcatccaatcca
gattcacctgctgcaggaattacctctgatggttctttgtctaggacattatcagaagag
ggacttgaagatgatgctctgcatttaatatcatccatggagattggtgggcagaattta
ccacgacagtctggcttgaaatcgaaaaatgattcaataaggagccaaactgatgaatct
atctcaactgctgatatgaggattaaactgcacctttgcaaggtccggtttcttctcctc
accaggaatctcaaggcagctaagcgtgaagttaagatggctatgaacacagcacgggcg
aaggatcattctatggctctctatctgaagtcccagcttgaatatgcgcgcgggaatcat
cgaaaagcgatcaagctcttgatggcatcaagtaatcggacagaaatgggaatttctagc
atatactacaacaatctggggtgcatatactatcgacttggcaagcatcatacctcttct
gtactttttgccaaggctctgagtaatagttcctctctccggaaagagcagcctctaaag
ctctcaaccatctcacaggataagtctcttctcataacatataactgtggtgtgcagtac
ctggcttgtgggaaaccattacaagctgcaagctgtttctataaggccactcaggttttc
tataataggcctcttttatggctgcggattgcagaatgttgtctgatggcccttgaaaag
ggactgctcaaggccagtggtactgctgcttctgacaggtctgaagttaaagttcatgtc
gttggaaaaggaaagtggaggcaacttgttatggaagatgggatattaagaaatggacag
gaatctctttcaggtgcagaagatttggtggttaatgatagacagcctaagttatcagta
ttactggctcgtcagtgtcttctgaatgcactgcatctactgaactgttctgaatcaaaa
ggtcacaagtccatgcagcctcgtgcttctggtctggaagaaagtgaaacaggagaagca
gtaccatccaagagtgcaaacagtaagaatgggtcaactggtgaccctaaggcactgaat
gtggcagcatcaggtcagattaatgcaaacggggaggtgaaggagcaaaagggtgtgagc
agtcaacatgcctccttatcgagttctatctgtgagtatgaagccattggtagaaaagag
aatctgatgattgagcaagctgtattggctgatttggcttttgtagagctggaattggga
aatccattgagggcccttacaattgcaaaatctctcttgaaagtccaagaatgttctaaa
atatacatctttcttggcaatgtgtatgcagctgaggctctgtgcttgctaaaccggcca
aaagaagctgtggaacatttgtcaacatatatcgctggtagcaagtgtgttgatctaccg
tttagtcaagaggattctgaaatgtggagacaggagaaaacattggattttgaagatact
aatggtggatcagcgactttgaattcctttccaccagaggaatctcaagcatttgtgttc
ctcaagccagaagaggcacgcggaatgctctttgcaaacttagctgccatgtctgtgatg
caaggagacatcgaacaggcccaaaattatgcagtacaagcactttccacaaaacctcaa
cgtcctgaagctattcttactgcagtatacgtggatcttttgcgagggagatcacaagaa
gctctcaccaagttgaaacactgcagtcgtattaggttcctacccggcagtccaacttta
aatggttcatcttaa
DBGET
integrated database retrieval system
