Nicotiana tabacum (common tobacco): 107773699
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Entry
107773699 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107773699
03041 Spliceosome [BR:
nta03041
]
107773699
03036 Chromosome and associated proteins [BR:
nta03036
]
107773699
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107773699
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107773699
mRNA cycle factors
Common to processing body (P body) and stress granule
107773699
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107773699
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107773699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107773699
NCBI-ProteinID:
XP_016448601
UniProt:
A0A1S3Y951
LinkDB
All DBs
Position
Un
AA seq
603 aa
AA seq
DB search
MPTSWADSVSAAENLAAAAPPKSAYVPPHLRNRPASTDPPAQASYAGAAASGQGQSGYGG
PNVGGSRWSGPRNDFQSGYGGGGGRGGGWNSRTGGWDRGREREANPFADDDAEPFVEPEN
SGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEAVNQNIRRCKYVKPTPVQRHAIPIVL
SGKDLMACAQTGSGKTAAFCFPIISGIMRGQFPRPPCPRVAFPLALILSPTRELSCQIHD
EAKKFAYQTGVRVVVAYGGAPINQQLRELERGVHILVATPGRLVDLLERARVSLQMIRYL
ALDEADRMLDMGFEPQIRKIVQQMDMPPSGARQTMLFSATFPKEIQRLALDFLSNYIFLA
VGRVGSSTDLIVQRVEYVQETDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLE
HWLCMNGFPATAIHGDRTQQEREYALRSFKTGHTPIMVATDVAARGLDIPHVAHVVNFDI
PNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSVARALADLMQEANQEVPAWLSRYAARS
SHGGGKNRRGGNRFGGRDFRKDSSFNRGATDYYGGGANMSSGYGASGGYAASYGGAGVTS
AWD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccaacatcgtgggctgattcggtttctgcagccgagaatctggctgctgctgctccc
ccaaagtccgcatatgttccaccacatcttagaaatagacctgcttcaactgatcctcct
gcacaggcttcctatgctggggctgctgcatctggtcagggccaaagtggttatggtggc
ccaaatgtaggtggaagtcgttggagtggtcctaggaatgatttccaatctggttatggt
ggtggaggaggccgtggcgggggctggaatagcagaacaggtggttgggatcgggggagg
gaacgggaagctaacccctttgcagatgatgatgctgaaccctttgttgaaccagagaat
tctgggatcaactttgatgcgtacgaggatattcctgtggagacaagtggggataatgtg
ccccctcctgtgaacacttttgctgagattgatttaggtgaagctgtaaaccaaaatatc
aggagatgcaagtatgttaagccaacccctgtgcaacggcatgctataccaattgtactc
tctggtaaagatttgatggcttgtgctcagactggttctggcaaaactgctgctttctgc
ttccccatcataagcggaatcatgcgggggcaatttccaagacctccatgtccgcgggtg
gcatttccactggctcttattctttctccgacaagggagctctcatgccaaatccatgat
gaagctaagaaattcgcatatcaaactggtgtcagggtggttgttgcttatggtggtgct
cccataaaccaacagcttcgagaactagagagaggagtgcatattcttgtggcaacacct
ggacgattggttgatttacttgagagagctagagtctcgttacagatgataaggtacttg
gctttagatgaggcagatcgaatgcttgatatgggttttgaacctcaaataaggaaaatt
gtgcaacaaatggacatgcctccatcaggtgcaagacagacaatgctattcagtgccact
tttcccaaagagattcagagactggcattggattttctttcaaattatatctttttggcc
gtgggaagggttggctctagtactgatctgattgtccaaagagttgaatacgttcaggag
actgacaagagaagccacttgatggatctccttcatgcacagagggcaaatggtgctcat
ggcaagcaagctcttacccttgtttttgtggagactaagaagggagccgattcactggag
cattggctttgtatgaatggtttccccgctactgctattcatggcgatagaactcagcag
gaaagagaatatgccctgagatccttcaaaactggtcacacaccaattatggttgcaaca
gatgtggcagcacgtggtctcgatatcccccacgttgcacatgttgtcaactttgacatt
ccaaatgacattgatgattatgtccaccgtattggaaggacagggcgagcaggaaaaaca
ggtttagcaacagctttctttaacgagaacaattcgtcagtggcaagagcactggctgat
ctgatgcaagaagcaaaccaagaagtacctgcttggctctctcgctatgctgctcgatct
tcacatggaggcggcaaaaatcgtcgtggtggaaatcgttttggcgggcgtgatttccga
aaggattcctctttcaatcgaggggccacagactactatggtgggggggccaatatgagc
agtggctatggtgcatctggtggttatgctgcatcatatggtggtgcaggtgtgactagt
gcctgggactaa
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