Nicotiana tabacum (common tobacco): 107773856
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Entry
107773856 CDS
T04643
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107773856
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107773856
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
107773856
NCBI-ProteinID:
XP_016448768
UniProt:
A0A1S3Y9R5
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Position
Un
AA seq
595 aa
AA seq
DB search
MPHKTGMEGVDSKCHLYANFRADLIFILSKNRRRLTTTTAVKLDIQTEQVTLSNGIANVT
LSIPDGLVTNISYGGIDNLLATQNVKNDRGYWDVFWNQTASRRVRKKFLGTSFEVIMDSE
NQAEISFKNTWNASESDELPLNFDIRFVMLRDTPGFYTYAIFERLEGWPLVYIENLRIVF
KLQQDMFHYMAISDERQRVMPMPVDRETGEVLDYKEAVLLTNPTNPDLKGEVDDKYFYVN
DNKDDRVHGWVGANPPVGFWMIIPSDEFRTGGPYKQDLTSHVGPTVLSVFVSRHYAGEDL
VIKFQQGEPWKKVIGPVCLYLNSDASAKDSPSMLWDDAKKRINQEVTSWPYDFPVSTDYI
KSNQRGAVRGQLFVNDSTTTLISASNASVGLAPPGDSGSWQRENKGYQFWIKADASGNFS
IENVISGTYNLYATVPGIIGDYKYTSDVQVTPGSSIELGSLVYNPPRNGVTLWEIGVPDR
TAAEFFVPIPPPQFKVHVYQNNSESIFRQYGLWEQYSALYPDNDLIYNVGTNNYSTDWFF
AHVTRNIGNNTYNATTWRIIFSLESVDNTSNYTLQLALAAAQRAELQVCSLSLIP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccacataaaactggaatggagggagttgatagcaaatgtcatctttatgcaaatttt
cgtgctgacttgatatttattttgtctaaaaacaggcgaagattgacaacaacgacagcc
gtcaaattggacatacaaactgaacaagtgacactgagcaatggtatcgccaatgttact
ttgtcaataccagatggtctcgtcacgaacatatcatatggtggaattgacaacttactt
gcgacccaaaatgtcaaaaatgatagagggtattgggatgttttctggaatcagacagca
tctcgaagagttcgaaaaaagttcttaggaacaagtttcgaggtcataatggacagtgaa
aaccaggcagaaatttcttttaaaaatacatggaatgcttctgaatctgatgaacttccg
ttaaactttgacataaggtttgtgatgctgcgagacacacccggattttatacttacgct
atatttgaacgtttagaaggatggccccttgtctacatcgaaaatctaaggattgtcttc
aagcttcaacaagacatgtttcattacatggctatctcggatgagaggcagagggtcatg
ccaatgccggtggatcgagagacgggcgaggtgcttgactacaaagaagctgttcttttg
acaaatccaactaatccagatctaaaaggagaggtggatgacaaatatttctatgtaaat
gataacaaagacgatagagttcatgggtgggtaggtgctaatcctcctgtagggttttgg
atgataattccgagtgatgagtttcgtaccggaggaccttacaaacaagatctcacttca
catgttggtccaactgtactttctgtatttgtaagtagacattatgccggagaagatctg
gtaatcaaatttcaacaaggagagccttggaaaaaagttattggccctgtatgcctgtat
ctcaactcagatgcttcagctaaggacagtccatccatgctttgggatgatgcaaagaaa
aggattaatcaagaagtcacaagctggccctatgattttccagtttcaactgactacatc
aaatctaatcaaagaggagcagttagaggtcaacttttcgttaatgacagcactactact
ttaatatcagcatccaacgcttctgtagggttagcaccaccaggagattctggatcttgg
caaagagaaaacaaaggatatcagttttggattaaagcagatgctagtgggaatttttcc
atagaaaatgtcatatctggtacatataacttgtatgcaaccgtcccgggaattattggg
gattacaaatacacttctgatgtacaagttactccaggttctagtattgaattagggagt
ttggtttataatcctccacgaaatggagtcacactttgggaaatcggtgtgccagatcgc
acagctgctgaattcttcgtaccaattccacccccacaatttaaagttcacgtataccaa
aacaattctgaatcaatatttagacagtatggtttgtgggaacaatatagtgctttatat
cctgacaatgatctcatctacaatgttgggactaacaattattcaacagactggtttttt
gctcatgttacaaggaatataggaaataacacgtataatgctactacatggagaattata
tttagccttgaaagtgttgacaatacgtcgaattacactctccaattggctcttgcagca
gctcagagagctgaactacaagtatgtagcttatccttgattccttga
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