Nicotiana tabacum (common tobacco): 107773907
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Entry
107773907 CDS
T04643
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107773907
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107773907
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GFIT
Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
107773907
NCBI-ProteinID:
XP_016448821
UniProt:
A0A1S3Y8Z9
LinkDB
All DBs
Position
Un
AA seq
527 aa
AA seq
DB search
FIIIRGSSGFYSYGILERLEGWPNIDVYQGRIVFKLKEELFQYMAISDERQRIMPTAQDR
EMGQKLDYPEAVLLTNPTNSFIKGEVDDKYQYSCENKDNRVHGWISPNPRTGFWMITPTD
EFRTGGPLKQDLTSHTGPVNLNMFFSTHYAGESLGLKFRDGEPWKKVFGPVFTYLNSLSP
DELDTLTLWTDAKEQMFIETENWPYNFPLSEDFVRSDQRGIVTGRLLVRDSYESDKLITA
NSAFIGLAAPGDVGSWQMENKGYQFWTQTDTEGYFLINNVITGNYSLYAWIPGFIGDYMH
DAYINVNPGSRTRVETLVYDAPRNGPTLWEIGIPERTASEFFIPDAQPRLLNQLYVVNNA
ERFRQYGLWDRYTEIYPDDDLVFTVGLSNYQTDWFFAHVNRYIYNDDGNKTYVPTTWQVL
FDLDDIDQSANYTLQLALASANDAELQVQFNDAEPDAPHYTTGLIGKDNAIARHGIHGLY
RLYTINVPGSLLVFGTNVMYLKQTRSERPWRGIMYDYIRLEGPPESY
NT seq
1585 nt
NT seq
+upstream
nt +downstream
nt
gtttataataataagaggaagttctggattttactcttatgggattttagaacgtttgga
aggatggccaaatattgatgtctaccaaggaagaattgtcttcaagctcaaagaagaatt
gttccaatatatggcgatttcagatgaacggcaaaggattatgccaacggcccaagaccg
tgaaatgggccaaaaacttgattatccagaagctgttcttcttacaaacccaactaattc
ttttattaaaggagaggttgatgacaaatatcaatattcttgtgagaacaaggataatcg
ggttcatgggtggataagcccaaatccacgaaccggattttggatgatcacaccaaccga
tgagttcagaactggtgggcctctcaaacaagaccttacttctcataccggcccagtaaa
cctcaatatgttttttagtacacattatgctggagagagtttgggactgaaatttagaga
tggagagccctggaaaaaggtgtttggccctgtttttacatacctaaactcactttcacc
tgatgagctagacactcttacactatggactgatgcaaaagaacaaatgttcatagaaac
tgaaaattggccatataattttcctctttcggaggattttgttcgatctgatcaacgggg
tattgtaaccggcagattactcgttcgtgacagctatgaaagtgataagcttattactgc
aaactcagctttcattggattagctgctccaggagatgttggatcatggcaaatggaaaa
caagggttatcagttttggactcaaacagataccgagggctatttcttgattaataatgt
catcactggaaattatagcttgtatgcttggatccctggatttattggagattacatgca
tgatgcatacatcaatgtcaacccaggatcaagaacaagagtagaaactctcgtatacga
tgcgccaaggaacggtccaacactctgggaaataggaattcctgaaaggactgcttctga
attcttcattcctgatgcacaaccaagacttctgaaccaattatatgtcgtaaataatgc
agaaaggttcaggcaatatggattatgggataggtatacagagatataccctgatgatga
tttggtttttactgttggattaagcaactatcaaacagattggttctttgctcatgtcaa
tcgatatatttacaatgatgatggaaacaagacttatgtaccaactacatggcaagttct
atttgatcttgatgatattgatcaatcagcaaattatacccttcaactagcattagcctc
agcaaatgatgctgaactacaagttcaatttaatgatgcagaaccagatgctcctcacta
tacaacaggattgataggcaaagataacgcgatagctagacatgggattcatggattata
caggctatatactataaatgttcctggttctcttcttgtatttggaaccaatgttatgta
tctcaagcaaactagaagtgaaaggccttggagaggaattatgtatgattatattcgtct
cgaaggtcctcctgaaagttattaa
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