Nicotiana tabacum (common tobacco): 107774089
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Entry
107774089 CDS
T04643
Name
(RefSeq) uncharacterized LOC107774089
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107774089
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107774089
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107774089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107774089
NCBI-ProteinID:
XP_016449040
UniProt:
A0A1S3YA03
LinkDB
All DBs
Position
Un
AA seq
540 aa
AA seq
DB search
MGQRSMSYSNHIIDLGADQRSQEYIRPEPCVLYGSFTAFPHPNVHTIVPALGNSGNFYLR
HLPDPREGGLLYGMSSSNGVQPRHPATNIDAAIATSSNHYNPYVAIPSASTDFPVPVNHG
LHDRRPFSSTHSILGISADSFGRNDPYIDSVRGSFKQKNHSALVGPSTSVVPVITRARES
DVSLTDTVSFTPCAYGGNESPSFIEDGVQRSGRNRSASGRDTVSQNNNNHLLQGDYVGQA
YQCPGNPWLDLPFNSGDGEAETWAWNQAASLPYPPGGCIDAGNMGVQGYQVTASNGGLTS
FLHPPIPHGPPNHHHLPPNPQCVGGCSMSFSPQVTSSSRRNLRNSSSNSTNNPFQGVVEG
GSRYIRPFPPTGFRFYRPRRREFILETNAQQRNLPDMRVLPENEVAMLDVPGYHEVGDAV
DQHRDMRLDIDHMSYEELLALGEQIGDVTTGLSEEAIVSNLKTRIFLSSETPCALESATC
LDHETDFCVICQTDYGDQEKIGILECRHECHEECVKKWLVVKNTCPICKSKALSTEKLGL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaaggagtatgtcatacagtaatcacataattgatttgggagcagatcagcgg
agtcaagagtatatccgtccggagccttgtgtgttgtacgggagctttacagcttttcca
catccaaatgtccacactatagtaccagctctaggaaacagtggtaatttctatttgcgc
catctaccagaccctcgagaaggcggtttactttatgggatgtcatcgtccaatggggtt
caaccacgccatcctgccaccaacattgacgcagcgattgcaacatcatcaaatcactat
aacccttacgtggctattccatctgcatcgacagactttccagttccagtaaatcatggg
ttacatgatcggcgtccattctcaagcactcatagcatccttggaattagtgcagacagt
tttggtaggaatgatccttatatagacagtgtcagaggctcatttaagcaaaagaatcat
tctgctttggtggggcctagtacttccgtcgtcccagtgatcacaagagcacgtgaatct
gatgtttctttgacggatactgtatcatttactccatgcgcgtatggagggaatgagtca
ccatcgttcattgaagatggagtacagagaagtggtaggaacagatctgctagtggtcga
gatactgtatcgcaaaacaacaacaatcacctgcttcaaggagactatgttggccaagcc
tatcagtgtcctggcaatccttggttggatctgcctttcaatagtggtgatggtgaggct
gaaacttgggcctggaatcaggctgcttctttaccatatccacccggtggctgtatagat
gctggaaacatgggtgtgcaaggttatcaagtaactgccagcaacggaggtttgactagt
tttctgcatccacccattcctcacggaccacccaaccatcatcatctgccacctaatccg
caatgtgtgggaggctgcagtatgagtttctctccgcaggtgacatcatcttcacgcaga
aacctacgaaatagttcgtccaatagcactaataatccattccaaggtgttgtagaggga
gggtctagatatatcagaccctttccaccgactggctttaggttttacagacctcgtcga
agggaattcatacttgaaacaaatgctcaacagcgcaacctccctgacatgagagttttg
ccagaaaatgaagtggcaatgctggatgttccagggtaccatgaagttggtgatgctgtt
gatcagcacagagatatgcgtttggacatagatcacatgtcttatgaggaacttcttgca
ctgggggagcaaattggcgacgtgacaactggtttatcagaggaagccattgttagcaat
ttgaaaacgagaatatttttgtcttccgagactccttgcgctctggaaagtgctacatgt
ttagatcacgaaactgatttctgtgtcatatgccagactgattatggcgaccaagaaaag
attggcattcttgagtgcaggcacgagtgtcatgaagagtgcgtaaagaaatggttggtt
gtgaagaatacttgtcctatctgcaaatccaaagcattgtctacagagaaactgggattg
tga
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