KEGG   Nicotiana tabacum (common tobacco): 107774338
Entry
107774338         CDS       T04643                                 
Name
(RefSeq) splicing factor U2af large subunit B
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107774338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107774338
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107774338
 Complex B
    107774338
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107774338
NCBI-ProteinID: XP_016449319
UniProt: A0A1S3YB35
LinkDB
Position
Un
AA seq 570 aa
MPYYEGNGEDIDNYAGSSPPPKSRSSHGHGPTPDDYTDSKSQHSSRENEKDRDSSRSREK
DRERGRDKDRDKDRDRGRDRDRGRDRDRDREREKDRDRHHRDRHRDRSDRREKERTRDRD
DDDRHRTRDYDQQREHDKDRESRHKHRSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPT
SAMLPGITAAAGQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYV
GGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAM
ALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFV
GGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGI
KMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPATLATKVLSLTEVVSAD
ELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGKPTPGVGKVFLEYADIDSASKAR
QSLNGRKFGGNQVVAVFYPENKFYEGDYDG
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgccgtactatgaaggcaatggagaagacatagacaattacgccggctcttctccgcct
cccaaatccagaagcagccatggccatggccctaccccggacgattacaccgactccaag
tctcagcatagttctcgtgagaacgaaaaagatagggattcatcaagaagcagggaaaag
gatagggagagagggcgtgataaggaccgggacaaggatagggatagaggcagagaccgg
gacaggggtagggacagggacagggatagagagagggagaaggaccgtgatcgtcatcac
agagaccgccatagggatcggagcgacagaagggagaaggaaaggaccagagatagagat
gatgatgatcgtcaccgaactcgagattatgaccagcaaagagaacatgacaaagataga
gagagtcggcataaacacaggtctcgctcaaggggtagatctgagcacagatcaaggtct
cgatcgcgttctcgatccaagagcaaaaggatcagtggttttgatatggcacctcctacc
tctgcaatgttacctggcattactgctgctgcaggtcaagttcctgggaccaacccacca
attcctggaatgtttcctaacatgtttcctttagcatcgggccagtttggagctcttcct
gttatgccaatccaggcaatgacacagcaggctaccaggcatgctcggcgagtttatgtt
ggtggactacccgctcatgcaaatgaacagtctgttgcgaccttctttagtcatgttatg
tctgcaattggaggaaacacagctggtccaggggatgctgttgtcaatgtctatataaac
tatgaaaagaagtttgcttttgttgaaatgagatcagtagaggaagctagtaatgccatg
gcattggacggcatcatatttgagggcgcaccctgtaaggtcagaagaccgagtgattac
aatccttctctggctgctactcttggtcctagccaaccaaacccaaacctcaacctggca
gctgttggattgagcccaggttctgctggagggctggaaggtcctgatcgtatttttgtt
ggtggtttgccctactatttcacagaagctcagattagagagctgttagagtcttttggt
ccacttagaggatttgatttggtcaaagatagagaaactgggaactcaaaaggatatgcc
ttctgtgtctatcaggatgtctcggttactgatattgcttgtgcagctcttaatggtatt
aagatgggtgataaaacccttactgttaggcgtgctaaccagggtacaacacaacctaaa
ccggagcaagagagtgtattgttacatgcacaacagcagatagctttgcagagactcatg
ttacaacctgctacattagccacaaaggtcctgagcttaacagaagtcgttagtgcagat
gagctcaacgacgatgaggactatcaagatattttggaagacatgagaactgaatgtggg
aaatttggatctctggtgaatgttgttattccacgtccaagtcctaatggcaagcccaca
ccaggggttggaaaggtatttttggagtatgcggatatcgacagtgccagcaaagctagg
cagagtctgaatggaagaaaatttggtggcaaccaagttgttgctgtcttctatccagaa
aacaagttctacgagggggactatgatggttag

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