Nicotiana tabacum (common tobacco): 107775060
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Entry
107775060 CDS
T04643
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107775060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107775060
Spliceosome [BR:
nta03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107775060
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
107775060
NCBI-ProteinID:
XP_016450219
UniProt:
A0A1S3YDK8
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All DBs
Position
Un
AA seq
563 aa
AA seq
DB search
MTKKREVEDSMVAEEASPKRQKVIEHSSPSLAPTAFENPLLPLASYDDDDEDDEDDGRRG
HIAEQVINNGGNKELNGYSSDEEEDEDDEYHGRSQGKRNRAIEIRRDCPYLDTVNRQVLD
FDFEKFCSVSLTNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVYINLRTEKVYCLPD
GYEVIDPSLDDIIHVLNPRFNGEQVEQLDKSRQWSRALDGSDYLPGTIGLNNIKETDFVN
VTIQSLMRVTPLRNFFLIPENYQHSRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM
KASKKRFRIGAQSDPVEFMSWLLNTLHAELRTSKKGSSIIHRCFQGELEVVKEMHSRPIT
EKRENGDAPNNGNGEDGQHGSHNIAMESSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPL
FNILKKFDGETVTEVVRPRIARMRYRVTKLPQYLILHMRRFTKNNFFMEKNPTLVNFPVK
NLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHV
SETLPQMVALSEAYMQIYEQHQL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagcgagaagtagaagatagcatggtggctgaagaggcaagcccaaaacgg
cagaaggtaatagagcattcttctccctctcttgcaccaactgctttcgagaatccactt
cttccacttgcatcttatgatgatgatgatgaagacgatgaggatgatggaaggagagga
cacattgccgagcaagtcataaataatggtggaaacaaggagctaaatggctactcatcc
gacgaggaagaagatgaggatgatgagtatcatggtagaagccaagggaagcgaaatcgt
gcaattgaaattcggagggactgcccttatcttgatactgtaaatagacaggtattggat
tttgactttgagaaattttgctcggtctctctcacaaatttaaatgtgtatgcatgttta
gtttgtgggaagtatttccaaggaaggggccctaaatcccatgcatatacacacagtctt
gaagcagggcaccatgtgtatatcaatttacgaacagagaaagtttattgtcttcctgat
ggatatgaagtcatagatccatcgcttgatgacattatacacgtgctgaatccaagattt
aatggggagcaggttgaacaacttgataagagccgacaatggtccagagcacttgatggg
tctgattatcttcctggaacgattgggctgaataacatcaaggagactgattttgtcaat
gtcacgattcagtctttgatgcgagtaactcccttgagaaacttctttcttatccctgaa
aattatcaacacagtagatctcctcttgttcatcgatttggagagctcacccgaaagatt
tggcatgcacggaactttaagggacaggtgagtccgcatgagttcttgcaagcagttatg
aaagctagtaaaaaacgttttcggataggtgcacagtctgaccctgttgaatttatgtca
tggcttctgaatacccttcacgccgagcttagaacttccaaaaaaggcagtagcataatc
caccggtgctttcagggggaattggaggttgtgaaagagatgcatagtagacctattacg
gagaagagggagaatggggatgccccgaataatggcaatggggaagatggtcaacatgga
tctcacaatattgccatggaaagtagcagaatgcctttcttaatgcttggactcgatctg
ccacccccacctctttttaaagatgtcatggaaaagaatattattccccaggtaccatta
ttcaacatacttaagaagtttgacggtgaaactgtgactgaagttgtaaggcctcgtata
gcgaggatgagataccgtgtaacaaaattgccgcagtatctaattctccacatgcgaagg
tttacaaagaacaatttctttatggagaaaaatccgacacttgttaacttcccggtgaag
aatttagagctcaaggattatattcctctgccagcaccaaaggagaatgagaagcttcgc
tcaaagtatgatttgattgctaatattgttcatgatggtaagccaggtgaaggatcctac
agggtgtttgtccaacggaaatcagaagaactttggtatgagatgcaagacctacatgtt
tctgaaactcttccccaaatggttgcactttctgaggcttatatgcaaatatatgagcag
catcagctgtga
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