Nicotiana tabacum (common tobacco): 107775268
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Entry
107775268 CDS
T04643
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04120
Ubiquitin mediated proteolysis
nta04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107775268
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107775268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107775268
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107775268
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107775268
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107775268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
U-box
zf-RING_5
zf-rbx1
zf-C3HC4_4
Vps52_CC
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107775268
NCBI-ProteinID:
XP_016450473
UniProt:
A0A1S3YEP9
LinkDB
All DBs
Position
Un
AA seq
379 aa
AA seq
DB search
MEEGESSVGDFVSAMKSENLSSGELAPGAAAVKSEQLLALPPPLPATVEKEEDKEMMCPI
CMQIMNDVFLTACGHSFCYMCIVTHLQNKRACPCCSVCLTVKQLYPNFLLNKLLMKTSAL
QIARRATPLEQLSQAIQQGSEVSVKELESLLSLLMDKKRKMEQEEAESSLRIMLEFLQFL
RKRKVEELNEVENDLQFIKEDISTVEKHRVELYRARHRYAAKMRMLVNYSSAVTVPPSLI
DKQGSGIVSGSSISQQQGYAASDTSQNRKADARAPENVHRTDSDSQNSDQSGLATARKRH
IYAQLDDIQGYYLQKRRHCTKQSHRQEERVANVINREGYCAELEDFQSVLSTFTQYSRLR
VVAELRPVDLFHSANVVSR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggtgagagttcggtgggagatttcgtgtctgcgatgaaatcggagaattta
agttccggcgaattagcgccaggggcggcggcggtgaaatcggagcaattgttagctttg
ccacctccattgccggcgacggtggagaaggaagaggacaaagagatgatgtgtccaatt
tgcatgcaaattatgaatgacgtgttcctcacggcgtgtggacatagcttctgctacatg
tgcattgtcactcatttacagaacaaaagagcttgtccctgttgttctgtttgcttaact
gttaagcagctttatcctaatttcctcctcaataagttattgatgaagacctctgctctc
caaatagccagaagggccacgcctttggaacaactttctcaagcaatacagcagggaagc
gaggtgtctgttaaagagcttgaaagcctcttatcacttcttatggacaagaaaaggaaa
atggagcaagaagaagctgaatcaagtctccggattatgcttgagtttctccagtttttg
aggaagcgaaaggttgaagagcttaatgaggttgaaaatgatctccagttcattaaagaa
gatataagtactgtggagaaacatagagtggaattgtatagggcaaggcatagatatgca
gcaaagatgagaatgctagtaaattattcttctgcggtgacagttccgccttcattgata
gataagcaaggtagtggcattgtttctggttcctcaatttcacagcaacaaggatatgct
gcttcagacacttcacagaacaggaaagcagatgcaagagctccagagaatgttcacagg
acagattccgactcgcagaattctgatcaatctggacttgcgacagcaagaaagagacat
atctatgcacagctcgatgatatacaaggttattatttgcaaaagcggcgacactgcaca
aaacagtcacatagacaggaagaaagggtagcaaacgtcataaacagagaaggttattgt
gcagaacttgaggattttcaatctgttctatctacctttacgcaatacagtcggttgcgg
gttgttgctgaacttaggcctgtcgatcttttccactcagctaatgttgtctcaaggtaa
DBGET
integrated database retrieval system
