Nicotiana tabacum (common tobacco): 107775427
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Entry
107775427 CDS
T04643
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107775427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107775427
03041 Spliceosome [BR:
nta03041
]
107775427
03036 Chromosome and associated proteins [BR:
nta03036
]
107775427
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107775427
Spliceosome [BR:
nta03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107775427
Complex B
107775427
Complex C
U2 SnRNP specific factors
107775427
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
107775427
TFTC complex
107775427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
107775427
NCBI-ProteinID:
XP_016450640
UniProt:
A0A1S3YEL6
LinkDB
All DBs
Position
Un
AA seq
785 aa
AA seq
DB search
MAVSEEESSSSSSAGCSSKSRSAAPRGASYLAKTVLRGSVVLQVVYGRIRSSTSYDVVLG
KETSVELVIIDEDGIVQSICEQPVFGIIKDIAVLPWNEKFRAGSPQLLSKDLLVVISDSG
KLSVLRFCNEMHRFFAVTHVQLSSPGNPRHQIGRMLAIDSSGCFIAASAYEDRLALFSRS
ASAGSDILDKRIFCPTDNQGKIGTASGFTSICGTIWSMCFISTDVRQPNKEHNPVLAILL
NRRRSYRTELMLIEWNMKEHSLHVIYQYSEPGPLAHHIIEVPHSYGILLVFRAGDAIVMD
FRDPHNPCFLYRISLNFTPPSVEEQNFVEEAIRIPDIIDEDGMYSVAASALLELSDLNKN
DPMNIDDDSNVKPGSNFVCSWSWNPGNEHSPRMIFCADSGELFLIDFLFDSDGLKISLSD
CLYKTQPAKALLWVRGGFLAVIIEMGDGMVLKVEEGKLVYRSPIQNIAPILDMSVVDYHD
EKHDQMFACCGMAPEGSLRVIRSGISVEKLLKTAPIYQGITGTWTVKMKMADSYHSFLVL
SFVEETRVLSVGVSFSDVTDFMGFQPDVCTLACGLVGDGLLVQIHQTAVRLCVPTIFKSF
TCFLKIWLCFTDNSSPECNLALTCSFYMGEIAMRVRKGSFSYKLPADDALKGCQVASNVG
DISQNSIMASTLLGSIIIFIPLTREEYDLLEAVQARLVIHPLTAPILGNDHAEFRCRGSL
ARAPKALDGDMLAQFLELTSMQQEAVLALPLGAQNTITFNSKQSPPPITVNQVVRLLERV
HYALN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcggaggaagaatcctcgtcttcatcctctgccggttgcagcagcaagtca
cgatcagctgctcctcgtggcgcctcttatttagctaagactgttctcagaggtagtgtt
gttctgcaagtcgtttatggccgtatccgctcttctacttcgtacgacgtcgttcttggc
aaggaaacatctgtagagttggtgattatagatgaagatggaattgtgcaatctatctgt
gagcagcctgtatttggcataataaaagatatagctgtgctgccctggaatgagaagttt
cgtgctggaagcccgcagcttttgagcaaggatctcctggttgttatttcggattcaggg
aagctctcagttctcagattttgcaatgaaatgcacaggtttttcgctgtaacacatgtt
caactttcatctcctggaaatccaaggcatcaaattggaaggatgttggctattgattcc
agtggctgtttcattgctgctagtgcatatgaagacagattggctcttttctcccgctct
gcttcagctggcagtgatatacttgataagagaatcttttgtcccactgacaatcaaggg
aagattgggactgccagtggtttcaccagtatctgtggtaccatatggagcatgtgcttc
atctcaacagatgttcgtcaaccaaataaggagcacaatcctgtattggccattcttctg
aataggaggagatcatataggactgagctcatgttgatagagtggaatatgaaggagcat
tcactccatgtaatatatcagtattctgaacctggaccactagcacatcatatcatagaa
gttcctcattcttatggaatcctgttagtatttcgtgctggggatgctattgtgatggac
tttagagatcctcacaacccttgttttctttatcgaataagtttaaattttacaccacct
tcagttgaggagcagaattttgtagaagaggctattagaattcctgatattattgacgaa
gacggtatgtatagcgttgctgcatctgcattgcttgagcttagcgacttgaataaaaat
gacccaatgaacattgacgatgatagcaatgtaaaaccgggttcaaattttgtctgctca
tggagttggaatcctggaaatgagcacagtcctaggatgatattttgtgctgattctgga
gagcttttcctgattgattttttatttgattctgatggcctgaaaatatctctgtctgat
tgtctttacaagactcaaccagccaaggcacttttgtgggtgagaggtgggtttttggca
gttatcattgagatgggtgatgggatggtgttaaaagttgaagagggaaaacttgtttat
agaagtccaatccaaaatatcgcaccaatattggatatgtccgttgtggattaccatgat
gagaaacatgatcaaatgtttgcctgctgtgggatggcacctgaaggatctttacgagtt
atacgcagtggcatcagtgtagagaaattgttgaaaactgctcctatttatcagggtatt
actggaacttggacagtgaaaatgaaaatggctgattcttatcattctttccttgtacta
tcatttgttgaagagaccagggttctatctgttggtgtgagcttttctgatgtaactgac
ttcatgggtttccagccggatgtttgcacgttggcttgtggtcttgtgggcgatggttta
ctggtgcaaatccaccagactgctgtgagactgtgtgtacctactatttttaaatccttt
acttgttttttgaaaatatggctttgttttacagataattccagtccagaatgcaatcta
gctctaacttgttcattctacatgggtgagatagctatgagagttcgaaaggggtcattc
tcttataaacttccagcagatgatgcacttaagggctgtcaagttgccagcaatgtcggt
gacatatcacaaaatagtatcatggctagtacacttttagggagcataattattttcatt
cctcttactagggaggaatatgatctcttagaagcggtacaggctaggcttgtcatccat
ccattgactgctcctatattgggaaatgaccacgctgaatttcgctgtcgtgggagtctg
gctagggcacctaaagctctggatggtgatatgcttgctcagttcttggagcttactagt
atgcaacaagaagctgtattagcattgcctcttggtgcacaaaacacgattacgttcaat
tcaaagcaatctcctcctccaattactgtcaatcaggttgtgcggctgctagaacgtgtt
cattatgccctgaactga
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