KEGG   Nicotiana tabacum (common tobacco): 107776317
Entry
107776317         CDS       T04643                                 
Name
(RefSeq) uncharacterized protein LOC107776317 isoform X1
  KO
K03873  elongin-B
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107776317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107776317
   03400 DNA repair and recombination proteins [BR:nta03400]
    107776317
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     107776317
   Cul5 complex
     107776317
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107776317
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_2 UCH_UBL1
Other DBs
NCBI-GeneID: 107776317
NCBI-ProteinID: XP_016451687
UniProt: A0A1S3YIB6
LinkDB
Position
13:90851702..90862840
AA seq 104 aa
MAMYIRVKHDKSTYFIQCDPTETILQIKEKLYNLIDQSVNDQRLILVATGDVLDDSKSLA
DQKVENDAVVALTLRKDDNEFEDVNIVRPNDFYQSRDAESGASW
NT seq 315 nt   +upstreamnt  +downstreamnt
atggcaatgtatatccgtgttaagcatgacaagtccacatactttattcaatgtgatcca
accgagacaatcctacaaataaaggagaaattgtataacctcatagatcaatctgttaat
gatcagcgattaatccttgtagctactggtgatgtgttggacgactcgaagtcattggct
gatcagaaggttgaaaatgatgctgtggtggcactgactctgaggaaagatgacaatgaa
tttgaggatgtaaatattgtgagaccaaatgatttttaccagtcccgtgatgcagaaagt
ggtgcaagttggtga

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