Nicotiana tabacum (common tobacco): 107776685
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Entry
107776685 CDS
T04643
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107776685
09124 Replication and repair
03420 Nucleotide excision repair
107776685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107776685
03400 DNA repair and recombination proteins [BR:
nta03400
]
107776685
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107776685
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107776685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107776685
NCBI-ProteinID:
XP_016452081
UniProt:
A0A1S3YIJ8
LinkDB
All DBs
Position
Un
AA seq
453 aa
AA seq
DB search
MPQVKIVPRNFMDMVASLPAVKLDMLYDNSFICEAILRSLPPLAKKYVLHLLYIDIPISA
KSMEESVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQLNLQKHIVHGGVL
PREPMPSNITVRLPSLEELEAYAVEQWECFLLHLISSSEAGKTTNISSSMMKVFQRGLLS
QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG
KAYNTNTLTDIQRSITKDLSDLGLVKLQQGRKESWFIPTKLATNLSISLADTTSRKQGFI
VIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAITKESLYKAFQNGITAEQIISF
LQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMMPAHLYDEFPSRDVFEAACDFARE
YGGLLWEDSKQMRIIVKADILTEMKEFLRRQKQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagtgaagatagtgcccaggaatttcatggacatggtggcttcattgcctgca
gtgaagctcgacatgctctacgacaattcctttatctgtgaagccatcctcagatcgtta
cctcccttagcaaagaagtatgtgctacacttgttgtatatagacataccaatctcggcc
aagtcaatggaggagtcggtgcttccagatggattctcaaagcataaagttgccattgat
agattgatacagctgagagtaatgacggaaacatttgacaggaagaaggaagccatgtat
caattaaatccaaaatttcaacttaatcttcagaagcatatagtccatggtggagtctta
ccaagggaaccaatgccttctaatatcactgtgaggcttcctagcttggaggagttagag
gcatatgctgttgaacaatgggagtgctttctgctgcatcttataagctccagtgaagct
ggaaagaccacaaacataagctcttcaatgatgaaagttttccagcgtggccttttaagt
cagagagatgacagggaacctccaaggttgactgaaagtgggttccagttcctgctgatg
gacacaaatgcacagctttggtacatcatcagggagtacataacaaatgctgaggagcga
ggtgtggattcagcagatcttattgcatttctgttggagctaagctttcatgttactggc
aaggcatacaatacaaacacattaactgatatccagcgaagtataactaaggacctttca
gatttgggactggtcaagctgcagcagggaaggaaagagagttggtttattcccaccaaa
cttgccaccaatctgtcaattagcttagcagatacaacgtccaggaaacagggatttatc
gttattgaaacaaacttcaggttgtatgcatattcaacatcaaaattacactgtgagatc
ctacgcctctttgcaagggtggaataccaacttccaaatctcattgtcggtgctattaca
aaagaaagtttgtataaagcttttcaaaatggcattactgctgagcagataatttctttc
cttcagcagaatgcccatcctagggttgcagagaggataccgtccgtgcccgagaatgtt
actgatcagattagattgtgggaatcagatctgaatcgggttgagatgatgcccgcccac
ctctacgatgaattcccttctagagatgtctttgaggctgcatgtgattttgccagggaa
tatggaggattactgtgggaggactctaagcaaatgcgcatcatagtgaaggctgacatt
ttgacagagatgaaggaatttcttcgtcgtcaaaagcaatag
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