Nicotiana tabacum (common tobacco): 107777708
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Entry
107777708 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107777708 isoform X2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107777708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107777708
Spliceosome [BR:
nta03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107777708
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Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
107777708
NCBI-ProteinID:
XP_016453295
UniProt:
A0A1S3YMY5
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Position
13:18070812..18078388
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AA seq
506 aa
AA seq
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MTKKREIEDCIVDKEVGGKRLKIVQQPSDQDHCRDVSQGKKNLTSEVRRDCPLLDTINRQ
VLDFDFEKLCSVTGRKFNVYACLICGKYYQGRGHESHAYTHSRKAGHHVYINVQTEKVYC
LPDGYEVKDPSLDDICLLLNPRFTLEQVEQLDKKRQWSRALDGSNYLPGTVGLNIVDKTD
FINVTIQSLMRVTPLRNFFLIPENYQQCESPLVHQFGELTRKIWHAGNFKGQVSPREFLQ
AVMDSSEKRFRVDVRSDPAEFMLWLLKTLCADLRGSKKGNNIIRQCFQGELEVVKEMHNR
TIAERRESGGNSQINGNGEDGGNEAGNFVSETSRVPFLMLELDLPPPPLFKDFMEKNIIP
QVPLFNILKKIDGETVTEVVHPRIARMRFRVKKLPRYLIFHMCRFTKNNFFLEKNPTLVN
FPLKNLELKDYISLPAPKQIRKLRSKYDLIANIVHGGKPEEGSYRVFVQRKSEELWYEMQ
DLHVSETVPQMVALSEAYVQIYEQQQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaagagagaaatagaagattgtattgtggataaagaggtagggggaaagaga
ctaaagattgtgcagcagccttctgatcaagatcattgcagagacgtcagccaaggaaag
aaaaaccttacaagtgaagtaagaagggactgccctttgcttgatacaattaatagacag
gttttagattttgactttgagaaattatgctcagtcactggcagaaagtttaatgtctat
gcatgtttaatttgtggaaagtactaccaaggaaggggtcatgaatcccatgcatataca
cacagtcgcaaagcagggcaccacgtatatatcaacgtgcagacagagaaagtttattgc
cttcctgatggatatgaagtaaaagacccatcgcttgatgacatttgccttcttctgaat
ccaagatttacgctggagcaagttgaacagcttgacaaaaaaaggcaatggtctagggca
cttgatgggtctaattatcttccaggaacggttgggcttaacatcgtggacaagactgat
tttattaatgtgacaattcagtctttgatgagagtaactcctcttagaaacttcttttta
atccctgaaaactatcagcagtgcgaatctcccctggttcatcaatttggagagctcacg
cgaaagatttggcatgcaggaaatttcaagggacaggtgagcccacgtgaattcttgcag
gctgttatggattcaagtgaaaaacgttttcgtgtagatgtgcggtctgatcctgcggag
tttatgttatggcttcttaaaaccttgtgtgctgatcttagaggttcaaaaaaagggaac
aacataatacgccagtgttttcagggtgaattggaggttgtgaaagaaatgcacaatagg
actattgctgagaggagagaaagtggtgggaattcacaaattaatggtaatggggaagat
ggtgggaatgaagcaggcaattttgtttcagagaccagcagagtgcctttcctaatgctt
gagcttgatttgccgccacctcctctctttaaggattttatggagaaaaacattatccct
caggtcccgctgttcaacatactgaagaagatagatggtgagactgtgactgaagttgtg
caccctcgtatagctaggatgagatttcgtgtcaaaaagcttccacgatatctaattttt
cacatgtgccggtttaccaagaacaacttctttttggagaagaaccccacccttgttaat
ttccctctgaagaatttagagctgaaggattatatttcgctccctgcacccaagcagatt
agaaaattgcgctcaaagtatgatctgattgccaatatcgttcatggtggcaagccagaa
gaaggatcatacagagtatttgtgcagcgaaaatctgaagaactttggtacgaaatgcag
gacctacatgtttcagaaactgtgcctcagatggttgcattatctgaggcttatgtgcag
atctatgaacaacaacagtga
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