KEGG   Nicotiana tabacum (common tobacco): 107777823
Entry
107777823         CDS       T04643                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107777823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107777823
   03036 Chromosome and associated proteins [BR:nta03036]
    107777823
Enzymes [BR:nta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107777823
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107777823
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     107777823
    Noncanonical PRC1 (PRC1.1)
     107777823
    Noncanonical PRC1 (PRC1.3/1.5)
     107777823
    Noncanonical PRC1 (PRC1.6)
     107777823
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-RING_4 zf-rbx1 zf-RING_11 zf-RING_6 zf-RING_10 zf-C3HC4_4 zf-C3HC4_5 Prok-RING_4
Other DBs
NCBI-GeneID: 107777823
NCBI-ProteinID: XP_016453455
UniProt: A0A1S3YNF4
LinkDB
Position
Un
AA seq 513 aa
MPAQKRYLSNYQDDNNNNEDDDENSPQHQHSRRKQSRRVAGEQTRANMEEQQVDEQDEEE
DDQAQAQDNDDEDDDDQEEINQSSEDDSEGSGTDPEAFDELIAVSRSEIRTNDFDERSFF
AQLFQVRKDVECSICLGIIKRTRVVMGCQHRFCRECIDKSMRLGNNECPACRIHCASRRS
LRDDPGFDTLIEAIYPDVEKYEEEELVFLEEERALNEQIQASIAQISQRQSEALIKRRKV
GKDIAASSAQRTPRNYHNAYSRRRRNSQGAEPERSDPNESENDDHDRNKDSPAKDERGTQ
TKFRKRRRRKGAPATPTSPSAASPDGGHIETAAELPRETVGSSPGPALKPETLTWGRGGA
RSHSRHGSASSSRNARNTRISKLIDYLESVRTNDGELNIHLELIPLDKQTTPSLKKPHLC
CRPSTSVEHLYEFVAQETKSQAKDVELLAIKDNTTVNHSTLMDASNMLARFVRGSDVTLQ
NLERRETLEGINSSCPLNKNLILAYVQKNSADM
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgccagcccagaaacgctatttgtcgaattatcaagatgacaataacaacaacgaagac
gatgatgagaactccccccagcatcagcacagccggcggaaacaatcccgacgtgttgcc
ggcgaacaaacacgagctaatatggaagagcaacaagtagatgagcaggatgaagaggaa
gatgaccaagcccaagcccaagataatgatgatgaggatgatgatgatcaagaggaaatt
aatcaatcgtctgaagatgattctgagggaagtggcactgaccctgaagcctttgatgaa
ttgatcgctgtgtcacgatctgagattcgcaccaatgatttcgacgagagaagttttttc
gcacaattatttcaagttcgtaaagatgtagaatgttcaatatgtctaggtattatcaag
agaactcgggttgtgatgggatgccaacaccgtttttgcagagaatgcatagataaatca
atgagactggggaataatgaatgccctgcatgccgcatacattgtgctagccgacggtca
ttgagagatgatcctggatttgataccttaattgaggcaatatatccagatgttgagaag
tacgaagaggaggagcttgtctttcttgaagaggaacgtgcactcaatgagcagattcaa
gcatccattgcccaaatttctcaacgtcaatctgaagcactaattaagaggcgcaaagtt
ggtaaagacatagctgcttcctctgcacaaagaacacctcgcaactatcacaatgcttat
tcgagaagaagaagaaacagtcagggggctgaacctgagcgatctgatccaaatgagagt
gaaaatgatgatcatgacaggaacaaagattcacccgccaaggatgagcgtggaacacaa
accaagttcaggaagcgccggaggcgcaaaggagctccggccaccccgacttctccttca
gctgcaagtccagacggtggacacattgaaaccgcagcagaactacccagagaaacagta
ggcagttctcctggacctgcattgaagcctgaaacacttacttggggaagaggtggtgct
cgaagtcacagtcgacacggcagtgccagcagtagcagaaatgctcgtaacactcgaata
tctaagttgattgattatcttgaaagtgtccgaacaaatgatggtgagttaaatatccat
cttgagcttattccattggacaaacaaacaacaccaagtctgaaaaagccccatctctgc
tgcaggccaagtacatcagttgaacacctctacgaatttgttgctcaggagacaaaatca
caagcaaaagatgttgaattactggcaataaaggacaataccactgttaaccattcaacc
ttaatggatgcatcaaatatgctagcccgatttgtcagggggtccgatgttactctgcaa
aacttggaaaggcgagaaactttggaaggaatcaattcaagttgcccattaaataagaat
ctgatccttgcttacgtgcaaaagaattcagccgatatgtga

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