Nicotiana tabacum (common tobacco): 107777863
Help
Entry
107777863 CDS
T04643
Name
(RefSeq) cyclic nucleotide-gated ion channel 2 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107777863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nta04040
]
107777863
Ion channels [BR:
nta04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107777863
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ
IQ_SCN5A_C
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107777863
NCBI-ProteinID:
XP_016453507
UniProt:
A0A1S3YND4
LinkDB
All DBs
Position
17:complement(98096630..98121311)
Genome browser
AA seq
709 aa
AA seq
DB search
MSSRQDLRFFLSRWFGIFRRRSVQPDNSDDNDDDSNPISNSIECYACTQVGVPVFHSTSC
DGAHQPEWEASAGSSLVPIQNRTNNSRTGKSRSSRNRHQSGPFGRVLDPRSKRVQRWNRI
ILLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVIRTCLDAVHLLHLWLQFRL
AYVSRESLVVGCGKLVWDARAIAAHYVRSVKGFWFDAFVVLPVPQVVFWLVVPKLIREEQ
IKLIMTILLLMFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAG
GCWYVLSIQRVASCLRQQCEQKASCNLSLSCSEEVCYQFLLPTGTVGNPCAGNSTTVMRK
PLCLDVNGPFPYGIYKWALPVVSSRSVTVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIF
SICLVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSQLRQRVRHF
EHQRWAMMGGEDEMELVKDLPEGLRRDIKRFLCLDLIKKVPLFHSLDDLILDNICDRVKP
LVFSKDEKIIREGDPVHRVVFIVRGRVKSSQNLSKGMVATSILEPGGFFGDELLSWCLRR
PFIDRLPASSATFTCIESTEAFGLDANHLRFITDHFRYKFANERLKRTARYYSSNWRTWA
AVNIQLAWRRYMVRTSRPVNQVTENGDNDHRLRKYAAMFLSIRPHDHLE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcgccaagacctacgcttcttcctctcaaggtggttcggcatattccgacga
agatcagttcaacctgacaacagcgacgacaacgatgatgacagcaacccaatctcaaac
tccattgaatgttatgcatgcactcaagttggcgtcccagttttccactccaccagttgc
gacggagctcaccaaccggagtgggaagcttcagccggttcctcgctagttccgattcag
aaccggactaataattcaagaaccggaaaatcccggtccagtcgcaaccggcatcagtcg
ggtccattcggacgtgtgttagaccctcgaagcaagcgcgtgcagagatggaaccgaatc
attttgttggcacgtggcatggccttagccgttgatcctctcttcttttacgccttatcc
atcggccgtggtggatcgccgtgcttgtacatggacggcggacttgcggctatcgtcacg
gtgatacggacttgcctcgacgccgtacacctcctccacttgtggctgcagtttcggttg
gcgtacgtgtcgagagagtcgctagttgttgggtgtgggaaactcgtgtgggacgcgcgt
gcgattgctgctcactatgttcggtccgttaaaggattctggttcgatgcttttgtcgtc
ctacctgttccgcaggttgtattttggctggtggttccaaaactaatcagagaagagcag
ataaagcttataatgacgattcttctactaatgttcttgttccagttcctccccaaagta
tatcacagcataagcttaatgagaaggatgcaaaaggttactggatatattttcggtacc
atctggtggggatttggccttaatctcattgcttattttattgcttctcatgttgctggg
ggttgctggtatgtactttctatacaaagagtagcttcatgtctaaggcagcagtgtgaa
cagaaagcttcttgtaatctgtctttgtcatgctcagaggaggtttgttatcagtttcta
ttgccaacaggcactgtgggaaatccatgtgctgggaactcaacaacagtaatgaggaag
ccactgtgtttagatgtcaatggaccattcccatatgggatatacaaatgggctctacct
gttgtttctagtaggtctgtcactgtgaagattctttatcccatcttttggggattgatg
acccttagtacatttggcaatgacttagaaccgacgagtcactggctagaagttatcttc
agtatatgccttgtgcttagtggattgatgctcttcactctgttgatagggaatatccag
gtgtttttacacgcggtcatggcaaagaagcgaaaaatgcaattgaggtgcagggatatg
gaatggtggatgaagaggagacagttgccatcacaattgagacaaagagttcgccacttt
gaacaccagagatgggctatgatgggtggagaagatgagatggaacttgtaaaagacttg
ccagaaggacttcgaagggatatcaaacgctttctttgccttgatcttattaaaaaggtt
cctctgttccatagtttggatgatctgattctagacaacatctgtgatcgcgttaagcca
ttggtcttctccaaagatgagaagatcattagagaaggagatcccgtgcaccgggtggtg
ttcattgttcgtgggcgagtaaaaagtagccaaaacctcagtaaagggatggtcgcgacg
agcatacttgagcctggaggcttctttggagatgagcttctttcctggtgcttacgtcgt
cccttcattgatagacttccagcttcttcagcaaccttcacttgcatagaatccacagaa
gcatttggcttagatgcaaaccatctacgctttatcacagatcacttcagatacaaattt
gcaaacgagaggcttaagcgaacagcaaggtattattcatccaattggagaacgtgggct
gctgtgaatatacagttagcttggcgtcgttacatggtgaggacaagccgtcctgtgaat
caggtaacggagaatggggataacgatcatcgccttcgaaagtatgctgcaatgttcttg
tcaatcaggccacatgatcatctcgagtag
DBGET
integrated database retrieval system
