Nicotiana tabacum (common tobacco): 107778015
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Entry
107778015 CDS
T04643
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04120
Ubiquitin mediated proteolysis
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107778015
04120 Ubiquitin mediated proteolysis
107778015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107778015
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107778015
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107778015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-ANAPC11
zf-RING_16
FlxA
zf-RING_5
zf-C3HC4_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
107778015
NCBI-ProteinID:
XP_016453676
UniProt:
A0A1S3YN08
LinkDB
All DBs
Position
Un
AA seq
484 aa
AA seq
DB search
MMRLQTYAGLSVIATLAAIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMALAIMCILWQL
TKKVFLGTLREAEAERLNEQSWRELMEILFAITIFRQDFSVMFLAMVTGLLFIKSLHWLA
QKRVEHIETTPAVTKLSHIRIVSFMGFLLLIDSIFLYNYMNHLIQTRHASVSLFFAFEYM
ILTTTTVATFVKYVFHVCDMLMEGQWERKAVYTFYLELIRDLLHLTMYMCFFLMIFINYG
VPLHLIRELYETFRNFKSRVADYIRYRKVTSNMNDLFPEATPEELNGGDTICIICREEMT
TAKKLVCGHLFHVNCLRSWLERQHTCPTCRALVVPPENGTNVAGSRYAQQGPGTSFTPQG
SQADPRTNSHVSQHQARLQAAAAAAAIYEKSIVYPSAQMLPCYLGANMPFGDSSWNNLST
SDTQLEAHRISLQQQIEILRSQLTLLQSSKTQRAAAAVGASDGKGKAISFESAQKGQAEG
QTGS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatgagactacaaacttatgcggggcttagtgtaatagctacactagctgctatttat
catgccttcagcagtagaggccagttttacccagcaatggtttatttatcgacatctaag
atcagtctggtgcttctcctcaacatggctctcgccattatgtgcattttatggcaacta
accaagaaagttttccttggtactcttcgggaggcagaggcggagaggctaaatgaacaa
tcatggcgggaactcatggaaatactttttgcaattactattttccggcaagacttctct
gtgatgtttcttgccatggttaccggcctattgtttatcaagtctttgcattggttggct
cagaaacgggttgagcatattgaaacaactccagcggttactaagttgtcccacattcga
atagtctctttcatgggcttcctcctcctcattgatagtatctttttgtacaactacatg
aaccatttgatacagacaagacatgcttctgtttctctcttctttgcatttgagtacatg
atactcactacaacaactgttgcaacattcgtgaaatatgtattccatgtatgtgacatg
cttatggaaggacaatgggagaggaaggctgtatatactttctacttggagcttattcgg
gacttgctccacttgactatgtacatgtgcttcttcctcatgattttcatcaattatggt
gtgcctctgcacttgattcgggaactttatgagacattccgcaacttcaagagtcgagtt
gctgactacatacgctatcgaaaagtcacctcaaacatgaatgatctttttccagaggct
acaccggaagagctcaatggaggtgataccatctgtatcatttgtcgtgaggagatgacc
actgccaagaaacttgtttgtggacatctctttcatgttaattgcctccggtcatggcta
gaacgtcagcacacatgtcctacatgcagagcccttgttgtaccacctgaaaatgggacg
aatgttgcaggatctcgatatgctcagcaaggcccaggaacaagttttacacctcaaggt
tctcaagcagatcccaggacaaacagccatgttagccagcaccaggctagactccaagct
gcagcagcagctgctgcaatttatgagaagtccattgtttatccttctgcacagatgcta
ccctgctatcttggtgctaacatgccttttggagatagttcttggaacaaccttagtact
tcagatactcaactcgaggcccataggatatccttacagcagcagattgagattctgcga
agccagctcacgcttctacagagttcaaagacacagagagcagctgctgcggtaggagct
tcagatggcaagggaaaagcaatttcgtttgagagtgctcagaaaggacaggctgaaggt
cagacaggttcttga
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integrated database retrieval system
