Nicotiana tabacum (common tobacco): 107778084
Help
Entry
107778084 CDS
T04643
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107778084
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107778084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
WSS_VP
Motif
Other DBs
NCBI-GeneID:
107778084
NCBI-ProteinID:
XP_016453759
UniProt:
A0A1S3YNB7
LinkDB
All DBs
Position
Un
AA seq
491 aa
AA seq
DB search
MLSAICILLFCFLISFFPLITNSLNLTLPYQHPYPEAVVQELQSRVNESISRRQLLDTTI
NAQCQTGNPIDDCWRCDPNWASNRQRLADCAIGFGQGTIGGRNGKIYVVTDSSDRDTVNP
TPGTLRHAVIQDEPLWIIFSADMFIKLKHELIVNSYKTIDGRGAKVHITGNGCITLQYIS
NVIIHNVHIYNCRPSGNTNIRSTPTHVGHRGRSDGDGISIFGSRNIWIDHCALSHCTDGL
IDAIMGSTAITISNNYFTHHDEVMLLGHDDRYLPDSGMQVTIAFNHFGVGLVQRMPRCRR
GYIHVVNNDFTEWQMYAIGGSANPTINSQGNRYMAPVDPNAKEVTKRVDTDEGEWSDWNW
RTDGDVMVNGAFFVPSGEGLSNQYAKASSVEPKSAVLIDQLTLNAGVFGGPRDNSISISY
GGGTTTGASGSGGAGSTGGGDSDFYGMIFGSGAKLSPSTTTTILLSHLIILVLYITTNHC
GQLSLQLLHLL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgctatttgcattctcttattctgtttcttaatctcattcttcccactaatt
acaaattcccttaatctcaccctcccctatcaacacccttaccctgaagctgtggttcaa
gaactacaaagtagggtgaatgagtccatatcaagaagacaactgttagacactaccata
aatgcacaatgtcaaacagggaacccaatagacgattgctggcgctgcgatccaaactgg
gccagcaatcgtcaacgtttagcagattgcgccataggcttcggccagggcacaatcgga
ggaagaaacggtaagatttacgtcgtcactgattcttcagatagagacaccgtaaatcca
acgccggggactctccggcatgccgtaatccaagacgaaccgctctggataattttctca
gccgacatgtttattaaattaaaacatgaactcatcgtaaatagttataaaacaatcgac
ggtcgtggtgcaaaagtacacattacaggaaatggatgtataacgttacaatatattagt
aatgttattatacacaatgtgcatatttacaattgtcgtccttcgggaaatactaatata
cgttcgaccccgactcacgttggacatagaggaagatcggacggtgatggaatttctata
tttggatcgcgaaatatatggattgatcattgtgcattgtcgcattgtaccgacggctta
attgatgctatcatggggtccactgcgattactatatctaacaactatttcactcaccat
gatgaagttatgctcttgggacatgatgatagatatttgcctgactccggaatgcaggtg
acaatagcattcaatcattttggagtgggattagtacagagaatgccaaggtgtagaaga
ggatatatacatgtagtgaacaatgattttacagagtggcaaatgtatgcaattggagga
agtgctaatcctactattaatagtcagggcaatcgttatatggcgccagtggatccaaat
gcaaaggaggtgacaaagcgcgtggacacagacgagggagagtggagtgactggaactgg
agaactgatggggacgtaatggtaaatggagcatttttcgtgccatcaggtgaagggctg
agcaaccaatacgcgaaggcctcgagcgtggagcccaaatccgctgttcttattgatcaa
ctcaccctcaacgccggtgtttttggtggcccgagggataatagtattagcatatcatat
ggaggtgggaccaccaccggagctagcgggagcggcggtgccgggtccactggcggcggc
gatagtgacttctatggaatgatatttgggagcggcgcaaaattatcaccatctacaacc
actactattttattgtctcatttaattattttagttttgtacattaccaccaaccattgt
gggcaattatcattacaattattacacttactatag
DBGET
integrated database retrieval system
