Nicotiana tabacum (common tobacco): 107778992
Help
Entry
107778992 CDS
T04643
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107778992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
HATPase_c
GAF
HisKA
PAS_9
PAS_4
PAS_3
PAS_8
Motif
Other DBs
NCBI-GeneID:
107778992
NCBI-ProteinID:
XP_016454809
UniProt:
A0A1S3YRG4
LinkDB
All DBs
Position
22:complement(111211083..111220067)
Genome browser
AA seq
1133 aa
AA seq
DB search
MASGSRTKHSHQSGQGQVQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKS
FDYSQSIKTTTQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEML
SLTPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF
YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVV
ESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRV
RMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND
EEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHV
LRTQTLLCDMLLRDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVE
WLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWG
GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEAS
NSKAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTD
LSVEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGSEQLKKAVFVVV
NACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT
CCSEWNTAMEKLTGWSRGEIIGKMLVGETFGSCCRLKGPDAMTKFMIVLHNAIGGQETDK
FPFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQDKKCYSQ
MKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSTACERQMSKIIRDVDLENI
EDGSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVL
ADFLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHS
SRWVTKEGLGLSMCRKILKLMNGEIQYIRESERCYFLIILDLPMTGRGSKSVG
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaagtagaacaaagcattctcatcagtcaggtcaaggtcaagttcaagct
caatcttcaggcacaagtaatgttaattacaaagattcaataagcaaagccatagcacag
tacacggctgatgctaggcttcatgctgtgtttgaacaatctggtgagtctggcaagtct
tttgattattcacagtctattaaaactactacacaatctgttgttcctgaacagcaaatt
actgcttatttgactaaaatccaaagagggggtcatattcagccttttggttgtatgata
gctgtagatgaggctagttttcgtgttattgcttacagcgaaaatgcgtgcgaaatgctt
agtctaactccacaatcagttccaagccttgagcggcctgagatcctcactgttggaact
gatgttaggaccctttttactccttctagctctgttttgctagaaagagcatttggggcg
cgcgagatcactttgctgaatcctatttggattcattccaagaattctggcaagccattt
tacgcaattttgcatagggttgatgtcgggattgtaattgatttggagcctgctagaaca
gaggaccctgctttatccattgctggcgcagtgcagtcacaaaaacttgctgtgagggct
atttctcatttgcaatcacttcctggtggggatgttaagcttttgtgtgatactgtggtt
gagagtgtgagggagttaactgggtatgatcgggttatggtatataaatttcatgaggat
gagcacggggaggtagtggctgagagcaaaagaccagatttagagccctatattggtttg
cattatcctgctaccgacattcctcaagcttcgcggtttttgtttaagcagaacagggta
agaatgattgtggactgccatgccacccctgtgcgggttgttcaggatgaatcactgatg
cagcctttatgtttagttggttccacacttagagcccctcatggttgccacgcgcagtac
atggcaaatatggggtctattgcgtcattaacactagcagttattatcaatggaaacgat
gaggaagctgttgggggccgaagttcaatgaggctgtggggcttggttgttggacaccat
acttctgctaggtgcattccattccctcttcggtatgcctgtgaattccttatgcaggcc
tttggactccaattgaacatggagttgcaactggcatcacagttgtctgagaaacatgtt
ttgaggacacaaacactgttatgtgacatgctccttcgagactcacctacggggattgtt
atccagagccccagtattatggaccttgtgaagtgcgatggcgctgctctgtactgccag
gggaagtactatccattaggcgttacaccaactgaagctcagataaaggacattgtggag
tggttattgacttaccatggggactcaacaggtttaagtactgacagtttggctgatgca
ggatatcctggggcagctttgcttggtgatgcagtttgtggtatggctgttgcttatata
acttctaaagatttcttattttggtttcgctcccatacagcgaaagagataaagtggggt
ggtgcaaagcatcatcctgaagacaaggatgacgggcagagaatgcatccacgttcttcc
ttcaaggcatttctggaagttgttaaaagccggagcttaccatgggaaaatgcagaaatg
gatgcaattcactctctgcagcttattctgcgagattcatttaaggatgccgaggcaagt
aattctaaggctgttgtgcatgctcagcttggggaaatggagttgcaagggatagatgaa
ctgagttctgttgccagagaaatggttagattgatagagactgcaactgctcccatattt
gctgttgatgtcgatggttgcataaatgggtggaatgcaaaggtcgctgaattgacagat
ttatctgttgaagaagcaatggggaagtccttggttcatgatcttgtgcataaagagtca
caggagactgctgaaaagcttctcttcaatgctctgagaggcgaagaagataaaaatgta
gaaataaagttaaggacatttggatctgagcaactgaagaaggctgtttttgtggtggtt
aatgcttgctctagcaaagattacacaaacaacattgttggtgtttgttttgttggccag
gatgttactgggcaaaaagttgtaatggacaagtttattcacatccaaggtgattacaag
gccattgtgcacagtcccaatcctctgatcccacccatatttgcgtcagatgagaacact
tgttgctctgagtggaacactgccatggaaaagctcactggttggtctagaggggagatc
attggaaaaatgttagttggtgagacttttggaagttgttgccgtctcaagggtccagat
gccatgacaaagttcatgatcgtgttgcataatgcaattggaggccaggaaacggacaag
tttccattttccttttttgaccgtaatgggaaatatgtgcaagctcttttgactgcgaac
aagagagtcaatatggagggccagattatcggggctttctgtttcatacagatagccagt
cctgaattgcagcaagctctaagagttcaaaggcaacaggacaagaagtgttattctcag
atgaaagagttggcatacctttgtcaggaaataaagagtcctttgaatggtatacgcttt
acaaattcattgttggaggcgacagatttgacagaaaaccagaagcagtatctggagaca
agtactgcttgtgagaggcagatgtctaagatcataagggatgttgacctggaaaacatt
gaggatggttctctgacccttgagaaagaagaattttttcttgggagtgtaatagatgct
gttgttagccaagtgatgttattgctgagggaaagaagtgtgcaattaatcagggatatt
ccagaggaaattaagacattaacagtacatggtgatcaagtgagaattcaacaggtcttg
gcagatttcttgcttaacatggtacggtatgcaccatcacctgatgggtgggtagagatc
caacttcagccaaatatgaagcaaatatctgatgaagtaactgttgtgcatattgaattc
aggattgtatgccctggtgaagggcttcctcctgaattggttcaagacatgttccacagc
agtcggtgggtaaccaaggaaggcctagggctgagcatgtgcagaaaaatcttaaagctt
atgaatggagaaatccagtatatcagagaatcagaaagatgttatttcctgatcatcctt
gacctaccaatgaccggcagaggttcaaagagtgttggctag
DBGET
integrated database retrieval system