Nicotiana tabacum (common tobacco): 107779141
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Entry
107779141 CDS
T04643
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03410
Base excision repair
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107779141
03410 Base excision repair
107779141
03420 Nucleotide excision repair
107779141
03430 Mismatch repair
107779141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nta03032
]
107779141
03036 Chromosome and associated proteins [BR:
nta03036
]
107779141
03400 DNA repair and recombination proteins [BR:
nta03400
]
107779141
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107779141
DNA Replication Termination Factors
ELG1-RFC complex
107779141
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107779141
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107779141
Check point factors
HRAD17(Rad24)-RFC complex
107779141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RuvB_N
AAA_24
RCF1-5-like_lid
AAA_5
AAA_11
nSTAND3
AAA_19
AAA_assoc_2
AAA_25
AAA_28
DNAX_ATPase_lid
ABC_tran
MeaB
AAA_30
bpMoxR
IstB_IS21
AAA_18
AAA_3
AAA_7
RNA_helicase
NTPase_1
DO-GTPase1
KTI12
SRP54
cobW
Motif
Other DBs
NCBI-GeneID:
107779141
NCBI-ProteinID:
XP_016454977
UniProt:
A0A1S3YSH5
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MASSSTTTPSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRL
MAVVDAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFGFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttctacgacgacaccgtcaggcccagaaatcccatgggtagagaagttt
cgacccacaaaggtatcggacatcgtaggcaacgaagatgctgtcgccagactccaagtt
attgctcgtgatggcaacatgcccaatcttatcttagccggtcctcctggtactggcaaa
accactagtatattggctcttgctcatgaacttctggggccaaactataaggaggctgtt
ttggagctaaatgcatcagatgatagaggcatcgatgttgtcagaaacaaaatcaagatg
tttgctcagaagaaagttactctaccccccgggcggcacaaagtaattattttggacgag
gctgacagcatgacatctggagctcagcaagcactgaggaggacaatggaaatatactcg
aactccactcgctttgctctcgcctgcaacacttcttctaagattatcgagcctattcaa
agtagatgtgccctggtccgatttgcaagattatctgaccaagagatccttggacgcctt
atggccgtggttgatgcagaaaaggttccttatgtacccgaaggtcttgaggctattata
tttactgctgatggagatatgagacaggcattaaataacttacaagcaacacacagtgga
tttggttttgtcaaccaagagaatgttttcaaggtttgtgaccagccccatccgttgcat
gtgaaaaatatggtccggaatgtccttgaagggaaatttgatgatgcttgcgcgggttta
aaggctctatatgacctgggctattcccccacggatattatcacaaccctcttccgaatt
ataaagaactatgacatggcggaatatgtaaaactggagttcatgaaggaaactggtttt
gcccacatgaggatctgcgatggggttggttcgtatctccagatgtgcggtttgctggct
aaactatcattggttcgagaaacggctaaggctgcataa
DBGET
integrated database retrieval system
