KEGG   Nicotiana tabacum (common tobacco): 107779387
Entry
107779387         CDS       T04643                                 
Name
(RefSeq) uncharacterized protein LOC107779387
  KO
K11790  denticleless
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107779387
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107779387
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_TEP1_2nd WDR55 DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st EIF3I Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR41 MIOS_WD40 Beta-prop_Aladin ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IFT140_1st TRM82_WD PAC11 Beta-prop_Nup120_160 KBP_C
Other DBs
NCBI-GeneID: 107779387
NCBI-ProteinID: XP_016455309
UniProt: A0A1S3YSV1
LinkDB
Position
3:complement(94399076..94404130)
AA seq 505 aa
MEGSNKHQSFFQDIKSRELHGFRVKKRPYISIESSEVDQIGALAVEHNGNTPPPMAVSFC
KTSENSHILAVADEGGYVSLYNTRLKFPPSSTHQQNAEKSKMSEWVAHENAIFDVCWIKD
DMNILTASGDQCIKVWDAQEKQCIRALMGHTGSVKSICSHPTNQDIIVSGSRDGSFSLWD
LRSSCSSSHIFSIPSIAAVHKAHVSPRQRRVKGGKATSMSITSVLYLKDEISIATAGAVD
SAIKFWDTRNLKSPILQACPHPNVSSHKGKRLHGVSSLSQDLNGVFIAASCMDSRIYLYN
VLQPEKGPVKTFTGCQINSFFVKSAISPDAAHVLSGSSDGNAYIWQVNKPLADPLILKNH
DGEVTAVDWCPSETGKVATASDDFTVRFWNIQSSCYSNTRSPSSIRRRVMGLTNIERRKL
FADEKPVSIKNDSDDCHSENLPNLTKTPEISTPESHKMKHFQSFEVEENLERTPEAASKS
PSSVLNPPSSLKRTIRDYFMHSQSD
NT seq 1518 nt   +upstreamnt  +downstreamnt
atggaaggatcaaataagcatcaatcttttttccaagatatcaaatcaagagaacttcac
ggattccgagttaaaaaaagaccatatatcagcattgaatcgtctgaggttgaccaaatt
ggtgccctcgctgttgagcacaatggcaacacgccacctccaatggccgtctcgttctgc
aagacaagtgaaaattcacatattcttgctgttgctgatgagggtggctatgttagcttg
tataataccaggttgaaatttcccccttcatcaacacaccagcaaaatgcagaaaaatct
aagatgtcagagtgggtcgctcatgaaaatgctatatttgatgtatgttggatcaaggat
gatatgaatatcttaactgcttcaggcgatcaatgcataaaggtatgggatgcacaagaa
aagcagtgtattagagcattaatgggtcacaccgggagtgtgaaatccatttgttctcat
cctacgaatcaggatattattgtatctggttcaagagatggctccttttccctatgggac
ttgaggagctcgtgcagcagcagtcacatattttccataccgtcaattgcagcagtccac
aaggctcacgtttctcctcgtcagcggcgggttaaaggtggaaaggctacttccatgagc
attacttcagtcctttacctgaaagatgagatctccattgctactgctggagcagttgac
agtgccataaagttttgggataccagaaacctgaagagtcctattctccaggcatgccct
catcctaatgtgtcatcccataagggaaagcgattacatggagtatctagtttatctcaa
gatttaaatggcgtgtttattgctgcttcatgcatggacagcagaatctatctctacaat
gtgcttcagccagaaaaagggccagtgaaaactttcacaggatgccaaattaattcattt
tttgttaagtcagcgataagtcctgatgcagctcatgtactcagtggttccagtgatgga
aatgcctatatatggcaggtgaacaaacctctagcagatccccttatattgaaaaaccat
gatggagaagttacagcagtagactggtgcccatctgagacaggaaaagttgctacagca
tcagatgatttcacggtacgcttttggaacattcaaagcagttgttactcaaacacaaga
tctccatcgtccattcgaagaagagtaatgggacttactaacatagaacgtcgcaagctg
ttcgctgatgaaaaaccagtgagcatcaagaatgactctgatgactgtcattcagaaaac
ttgccaaatttaactaagactcctgaaatcagcacaccagagtcacataagatgaaacat
tttcagagttttgaagttgaagagaacttagagcgaactccagaagctgcaagcaagagc
ccttcttcggttctgaatcctccatcctctttgaagaggacgattagagattattttatg
cacagtcaatcagattaa

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