Nicotiana tabacum (common tobacco): 107779415
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Entry
107779415 CDS
T04643
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107779415
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107779415
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
107779415
NCBI-ProteinID:
XP_016455335
UniProt:
A0A1S3YTN0
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All DBs
Position
Un
AA seq
391 aa
AA seq
DB search
MDNLIISCITVLLSSIFLFLQSNATSTFNVLSFGAKPNGQTDATQPFLKAWGAACSSVQP
ATIYVPRGRYLIKAATFRGPCKNRITVRNDGTLVAPLDYWAIGNSGYWLLFIQVNGISVI
GGNLDAKGAAFWACRKSGNNCPVGARSITFNWANDVVISGLLSINSQLTHIVFNSCNNVM
VRNVRIIAPDQSPNTDGIHVQSSTGVTIINSRIKTGDDCISIGPGTRNLWMENILCGPGH
GVSIGSLARNYEEDGVQNVTLVYSIFTGSDNGLRIKSWARSSTGFVTNINYRNIVMKYVD
NPIIIDQNYCPNNQDCPGETSGVKISQVTYENIQGTSTTPVAMKFDCSPSNPCEGIQIKD
IKLTHMNKKAQSFCKNVRGSKRGVILPDSCI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggataacctgataatatcttgcattactgtcctcttatcttctatatttctgttcttg
caatcaaatgcaacatcaaccttcaatgtgttaagctttggtgcaaaaccaaatggccaa
actgatgcaactcagccatttctgaaggcatggggcgctgcatgcagctcagtgcaacca
gcgaccatttatgttccccgaggacgttatctaataaaggcagctacatttagagggcca
tgtaaaaatagaataactgtaaggaatgatggaacccttgtggctccattggattattgg
gccattggcaactccggctactggcttttgttcattcaggtcaatgggatttcggtcatc
ggtggaaatcttgatgctaaaggagcagctttttgggcttgccggaaatcaggcaataat
tgcccagttggagctaggtcaataaccttcaattgggctaatgatgttgtgataagtggc
ttactatcaatcaacagccagctaacacatattgtgttcaatagctgcaacaacgtgatg
gttcgaaatgtaagaataatagcccccgatcagagcccaaacaccgatggcattcatgtt
caatcatcaactggggttactatcataaatagtagaatcaaaactggagatgactgtata
tctattggacctggcactagaaatctttggatggagaacattctctgtggacctggacat
ggtgttagcattggaagtctagcaaggaattatgaagaagatggcgtgcagaatgtgaca
ttggtttactcgatattcacaggatctgataatgggttaagaataaaatcttgggcaaga
tccagcactggttttgtcaccaacattaattaccgcaacatagtcatgaagtacgttgac
aatccaatcatcattgatcagaattactgccccaacaaccaagattgccctggcgagact
tctggtgtaaagattagtcaagtaacgtatgaaaatatacaagggacgtcaacaactcca
gtagctatgaagtttgactgcagtcccagcaatccatgcgaaggaatccagataaaagac
ataaagctcactcatatgaacaaaaaggcacaatctttttgcaagaatgttcgaggaagt
aaaagaggagtcattttgcctgacagttgtatatga
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