Nicotiana tabacum (common tobacco): 107779582
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Entry
107779582 CDS
T04643
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107779582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107779582
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107779582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107779582
NCBI-ProteinID:
XP_016455518
UniProt:
A0A1S3YTP8
LinkDB
All DBs
Position
Un
AA seq
1173 aa
AA seq
DB search
MDSGAASFPRRRTRQQWDRYFVEVIEKKKRLSQSGNPPQSSSNCSVNIGDDVVASGDIRE
SSSATGKLSKENTTCGVDNRKIGKWLEDESMVRSLDKGKKKMDNGNRMLSPGTCESMTKR
TFVQEISDDDDDDDDDDDDDDEEEEEEEEEEEEDSDPDVVVTGESAAVSALNSGSGSGSW
SNCVGLRSPIVTTADEVVSSTSSMCRTRGPSELHKSEEPTDFEESEDDCVKSQESSDDTT
ESSESESEASSDEDNDDPEDKDYRVNEPSSSSESDHDDDGVSCHIELQDNEEGKGSDIRI
GLDDDDDGRKETEDDDPVEQQENGEGKGESNEGLLPDLVFDGEKHRGRAYLLRPRSLSKS
KKRKLNHGNCSSPILLSDDEESESPFEEGTEAYDSTRDAAQKDKVDNLVKKVAEKEKEKA
DESVKNAAQKDRKTRKKCILKDLDFVKFVVDSIINVDDHDKLTSPVEKEQFPVKETLPLI
FRFEDEDPLPPEKEEWEKEIENLFAEMDMGILESCIGFTNPSLVEKVSGCQMGNHHLILD
EQIGLICKVCSHVHLESKYIYPAFAERNRGRHERKYFGESSPFLDVDGFRFDDPSAVHDS
AIYVEGTVWDLVPLHAKATMYPHQREGFEFMWKTIAGDIYLEKLSEPLSASRGGCIISHP
PGTGKTRLTIVFLQAFLKHFPKCRPVIIAPPKLLSNWEAEFQKWEADIPFHNLNNNDFSC
QEDEVTVGLYHCLSHAGRKNKHHIRMVKLKSWAKSKSILGISYDLFEKLTGENGDGYAKE
IREILLTLPGLVVLEEGHTPRNEQSLLYKAMTKVETQRRILLSGTVFQNNFKELYNTLRV
VSPKFAAESEQKWASLSNSIDTNARALEELRDMIAPLIHICSENVKMKSLPGIRDTLVYL
KPTDLQKKLLNMIPEYPGSFDFRNMVSLISVHPSLVANKKVFSDLESQLNERECRLDPNT
GVKTKFVVELIRLCDGMRERVIVFSQLLDPLRLIKEQLNSLFHWTLGREILYMDGELDVK
QRQKSISSLNDPKSDAKVLLASITACSEGINLIGASRVVLLDVHWNPSVEQQAVSRAYRN
GQTKFVHVYCPVASKWEVNKIEQQTRKKYHSGVLLSRNEANTCKTNPSCSVLEDNILESM
VQHESLRHIFEELPHEPRAYGFNSFNQPPKVSI
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggggcagcctcttttccaaggaggaggactagacaacaatgggatagatat
ttcgtcgaggtaattgagaagaagaagaggttgagtcaaagtggtaatcctcctcagtct
tctagtaattgttctgtgaatattggagatgatgttgtagcttctggtgatataagggaa
tcatctagtgcaacaggaaaactgtctaaagaaaacacaacttgtggagttgacaacaga
aaaattggaaaatggttagaagatgaaagtatggtaagaagtttggacaaaggtaaaaaa
aagatggacaatgggaatagaatgctcagtccaggaacttgtgagtccatgacgaaacgg
actttcgtccaggaaatatctgatgatgatgatgatgatgatgatgatgatgatgatgat
gatgaagaggaagaggaggaggaggaggaggaggaggaggacagtgatcctgacgttgtt
gtcactggggagtctgctgcggtgtctgctttaaatagtggatcaggttcaggatcttgg
tccaattgtgttgggttaaggagtcctattgtcactacagcagatgaggttgtttcatct
acctcaagtatgtgtaggacacggggccctagtgagttgcataaatcagaggagccaact
gattttgaggaatcagaggacgattgtgtaaaatcacaagaatctagtgatgatacaaca
gaatcttctgagtcagagtctgaagcttctagcgatgaggataatgatgaccccgaagat
aaggattatcgggtgaatgagccatcaagttctagcgaatcagaccacgacgatgatggt
gtgagttgtcatatagagcttcaagacaatgaagaaggaaaaggatctgatataagaatt
ggtttggatgatgacgatgatggaagaaaggaaacagaagatgatgatcctgtagagcaa
caagaaaatggagaaggaaaaggggagtcaaatgaggggctactacctgaccttgttttt
gatggtgaaaagcacagaggccgagcatatcttcttcggccacgctcactttctaagtca
aaaaagaggaagttaaaccatggaaattgtagtagccccattcttctcagtgatgatgag
gagtctgaatccccatttgaagagggcacagaggcttatgactcaacgcgagatgctgct
caaaaggacaaagttgataacttggtgaaaaaggttgctgaaaaggaaaaggaaaaggct
gatgaatctgtgaaaaatgctgctcaaaaggacagaaagactcggaagaagtgtattctt
aaggatctcgactttgtgaagtttgttgttgattctataataaatgttgatgatcatgat
aaacttacttctcctgtagagaaggaacagtttcctgtcaaagaaacacttccgttgatc
ttccggtttgaagacgaggaccctctccccccggagaaagaagaatgggaaaaagaaatt
gagaatttatttgctgaaatggacatgggtatcttagaatcatgtattggcttcacaaat
ccatctctggttgagaaagttagcggctgccagatggggaaccaccatcttattttagat
gaacaaattggactcatctgtaaagtttgttcacatgtgcatctggagagcaagtacatc
taccctgcttttgctgagagaaaccgggggaggcatgaaagaaagtatttcggagagtcg
tcaccgttcttggatgttgacgggtttagatttgatgatccttctgcagtccatgattct
gctatttatgtggaaggaactgtgtgggatttagttcctctgcatgccaaagcaacaatg
tatcctcatcaacgtgaaggatttgagttcatgtggaaaactatcgctggagatatatac
cttgagaagctgagcgagcctttatctgctagtaggggaggatgcataatctcacatcca
cctggaaccggaaaaacccgtctgaccatagtatttcttcaggcatttctgaagcatttt
ccaaagtgtcggcctgtaatcatagctccgcccaagttgctgtctaactgggaagccgag
ttccagaaatgggaggcggacattcccttccacaacttgaacaacaatgatttctcgtgc
caagaagatgaagtcacggttggtctctaccactgtttatcccatgccggaagaaaaaac
aaacaccatatacgtatggtgaagctgaaatcctgggctaaaagtaagagtatattgggg
atcagctatgacttgttcgagaagctcaccggagaaaatggagatggttatgccaaagag
attagagaaatacttctaacattacctggccttgtggtccttgaagaagggcatactcct
cggaatgagcaaagccttttgtataaagctatgactaaggttgaaacgcagaggcgtata
cttttgtctggaactgtcttccagaataactttaaagagttgtacaacaccctccgcgta
gttagtccaaagtttgctgcagaatctgagcagaaatgggcttctcttagcaattctatt
gacacaaatgcccgagcattggaagagcttagggatatgattgcaccactaatccatata
tgtagtgaaaatgtaaagatgaaaagccttccgggtataagggacacactggtatacttg
aagcccacagatttgcagaagaagttgctcaatatgattccagagtatccaggctcattt
gactttcgaaatatggtgtctctgatctctgttcatccttcattagtggcaaataagaag
gtgttctctgacttagaaagtcagctaaatgaaagagaatgtcggttggatccaaatact
ggagtaaaaacaaaatttgtcgttgaactaatccgactctgtgatggcatgagagagagg
gttatagtattcagccagttacttgatcctctaagactgatcaaggagcaactcaattct
ctctttcactggactttaggccgagagattctatatatggatggggaacttgatgtaaag
cagcgccagaaatcaataagttctcttaatgatcctaagagtgatgcgaaagtgctgctc
gcatcaataacggcctgttcggaaggaataaatcttataggagcctcaagagtagttttg
cttgatgttcactggaatccctcggtagaacagcaagccgtcagtcgagcctacaggaac
ggtcagactaaatttgtgcatgtttactgtccagtggcatcgaaatgggaggttaacaag
attgaacagcagacgaggaaaaaatatcattctggtgtacttttgtctaggaatgaagcg
aatacttgcaaaacaaatccttcttgttctgtgcttgaggacaacatactagaatccatg
gttcagcatgagagtctccgtcatatttttgaagagctacctcatgaaccccgtgcctat
ggctttaattcttttaaccaacctccaaaagtgagcatttag
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