Nicotiana tabacum (common tobacco): 107780328
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Entry
107780328 CDS
T04643
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107780328
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107780328
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
107780328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_19
DEXQc_Suv3
T2SSE
Motif
Other DBs
NCBI-GeneID:
107780328
NCBI-ProteinID:
XP_075075134
UniProt:
A0AC58RQX6
LinkDB
All DBs
Position
8:complement(17620615..17679180)
Genome browser
AA seq
2092 aa
AA seq
DB search
MLFQLPRLTNALREPFDVDQAYLHRKAILQNLNSRSTATSLEESKLARKIVYQWDQASPE
LRQAYKQFVGAVVELMKGEVVSEEFREVAFNVYRLFTGTVVEDEEHRSIAEKKLDLQKLV
GYAVSDSLLSRVASLAQRLYELQNYHPGNETVSLQEMSNGTTDEVEFGSDLVFRPPARFL
IDVSLEDSDFLVEQDDAPSSSHESQYDHGSSNFRESVSGVNFDLSWLRDACDKIVRGNTS
QLPRDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMFLVSQHRKEIVDAVH
HGLHALKADKMSPGGQSRTPSYAVQVTVQTESERQIDKLRRKEERKHRRGTNNGVEDDLS
AVSFSSLLHASEKKNIFEDLIGHGEGPNTLGPTALPQGTIRKHYKGYEEVIIPPTPTASM
KPGERLIEIKELDDFAQTAFHGYKSLNRIQSRIYHTTYNSNENILVCAPTGAGKTNIAMI
AILHEIKNHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLS
KNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTL
RQVESTQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEHN
FLARNELLNEICYNKVVDSLKQGHQAMVFVHSRKDTVKTADKLVELAGKSAESELFTNDE
HPQYEILKREVFKSRNKEVVQLFEHGIGIHHAGMLRADRNLTERLFSQGLLKVLVCTATL
AWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDK
LAYYLRLLTSQLPIESQFINSLKDNLNAEVVLGTVTNVKEACAWLGYTYLFIRMKMNPLA
YGIGWDEVMADPSLSLKQRDFISDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY
TSVETYNEMLTRHMNESELISMVAHSSEFENIVVRDEEQNELEMLARTYCQLEVKGGPSN
KYGKVSILIQLYISRGSIDTFSLISDAAYISASLARIMRALFEICLRRGWCEMSALMLDY
CKAVDRQIWPHLHPLRQFDRDISSEILRKLEERGADLDRLQEMQEKDIGALIRYAPGGKV
VKQFLGYFPLVQLSATVSPITRTVLKVDLVVAPQFVWKDRFHGTALRWWILVEDSENDHI
YHSELFTLTKKMARAEPHKLSFTVPIFEPHPPQYYIRAVSDSWLHADALYIINLHKLALP
EVQTSHTELLDLKPLPVTALGNGTFEALYKFSHFNPIQTQAFHVLYHTDKNILLGAPTGS
GKTISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMTDWRKRLVSQLGKKMVEMTGDYTP
DLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRM
RYISSQTERSVRFVGLSTALANAHNLADWLGVDENGLFNFKPSVRPVPLEVHIQGYPGKF
YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFINMPE
DALQMVLSQVTDQNLKHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV
NLPAHLVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY
KKFLYEPFPVESSLREQLHDHINAEIVTGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLE
VAEPGILNSYLSSLVQSTFEDLEDSGCIKITDDSVEPLMLGSIASQYYLKYTTVSMFGSK
IGPDTSLEVFLQILSGASEYDELPVRHNEENYNEKLSEKVPYAVDHSRLDDPHVKANLLF
QAHFSQSELPISDYVTDLKSVLDQSIRVIQAMIDICANSGWLSSTITCMHLLQMVMQGLW
FDRDSPFWMLPCMTDDLVSLLHKKGIASIQQLLDCPSKSLPAITGSSAASRLYQDMQHFP
RIQVRLKIQKKESNGGKIFTLNIRLEDANTQRRTAKAFTPRYPKVKDEAWWLVLCNTSAS
ELYALKRMSFSGRLQTNMDLPSVLTNFQGIKLILVSDCYLGFEQEYSIEGLA
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaactgcctcgcctgaccaatgctctcagagaaccattcgacgtcgatcaa
gcttaccttcaccggaaagcaattctccaaaatctcaactctcgcagtactgcaacttca
cttgaagaatcaaaacttgctcgaaagattgtatatcaatgggaccaagcttctcctgag
ttgcggcaagcgtacaagcagtttgttggggcagtggttgagttgatgaagggtgaggtt
gtgtcagaggagtttagggaggtggcattcaatgtttataggcttttcaccgggacagtg
gtggaggatgaggaacacaggagtattgctgagaagaagctagatttgcaaaaactcgtg
ggctatgcagtttcggactcattactatcgagagttgcttccttagcacaaagattgtac
gaattgcagaattatcaccctggaaatgagacagtctctttacaagaaatgtctaatgga
accactgatgaagtggaatttggctcggaccttgtctttagacctcccgcgcgattctta
attgatgtttctttggaagattctgattttcttgttgagcaggatgatgcaccttcttca
agtcatgaatcacagtacgatcatggctcctcaaattttagagaatctgtatctggtgta
aattttgatttaagctggttaagagatgcctgtgataagatagttagaggtaatacttcg
cagcttcctcgagatgaactggcaatggccatatgccgcgtacttgattctgagaaacca
ggtgatgagatagctggcgatttgcttgaccttgttggtgatggtgcatttgaaacagtt
caggatcttatcatgttcctcgtatctcagcacagaaaggaaattgttgatgcagtccat
catggactacatgcactaaaagctgacaagatgtctccagggggacaatcacgcacacct
agttatgctgttcaggtaactgttcaaactgagtctgagcggcaaattgacaaacttcgt
cggaaggaagaaagaaagcatagacgaggaacaaataatggggttgaggatgatttgtct
gccgtgagttttagttctttacttcatgcaagtgagaagaaaaacatatttgaggacctc
attggtcatggtgaagggccaaacaccttaggtcctacagcccttcctcaaggaactatc
agaaagcactacaaaggatatgaagaagtcattatccctccaacaccaactgcatctatg
aaacctggggagagactgattgagataaaggagctagacgattttgcacaaacagctttc
catggctacaagagtcttaaccgtattcagagcagaatttaccatactacttataatagc
aacgaaaacatactagtatgtgctcccactggggctgggaaaacaaacatagctatgatt
gctattctacatgagattaaaaatcactttagagatggttacttgcataaggatgaattc
aagatagtctatgttgctcctatgaaggcattagctgcagaggtcacatcaactttcagt
caccggttgtctccacttaatgtaactgtgagagaacttactggagacatgcagctttct
aagaatgagcttgaggaaacacagatgatagtgacaacgcctgaaaagtgggatgttatt
actcgtaaaagcagtgacatgtcactctcaatgctggtgaagctacttatcattgatgaa
gtccatttgctaaatgatgatagaggccctgtaatagaagcattagtagcccgtacactt
cgtcaggtggagtctacacagtctatgataaggatagtgggcctttcagccactttaccc
aactatttggaggttgcacagtttctaagggtgaatccggatacaggtttatttttcttt
gattcaagctaccgtccggtacctcttgcacaacagtatattggtattagtgagcataat
tttttagcccgcaatgaacttcttaatgagatatgctacaataaggttgttgattcctta
aaacaagggcatcaggctatggtatttgtccattcacgtaaggacacggtgaaaacggct
gataagttggttgagttggctggtaaaagtgcagagtctgagctgttcacaaatgatgag
catcctcaatatgagattttaaagagggaagttttcaagtccagaaataaggaggttgtc
caactgtttgaacatgggattggtattcatcatgctggaatgttacgtgctgacagaaac
ctaacagaaagacttttctctcagggacttttgaaggtccttgtttgcacagcaactttg
gcatggggagtcaatttgcctgctcacacagttgtgattaagggaactcaaatatatgat
ccaaaggctggtggatggcgagatctgggtatgctagatgttatgcaaatcttcggacgt
gctggaagacctcaatttgataaaagtggtgaaggcattataatcacttcacatgacaag
ttggcctattatttacgtctattgacaagtcaacttcctatagaaagtcagtttatcaat
tccttgaaagataatctaaatgctgaggtggtactgggtactgtaacaaatgttaaggaa
gcttgtgcttggcttggttacacttatcttttcattaggatgaagatgaatcctttggcc
tatggcataggatgggatgaggtcatggcagatccatcattaagcttaaagcaaagagat
tttataagtgatgctgctcgtgctcttgacaaagcaaaaatgatgcgttttgatgagaaa
agtgggaacttttattgcactgagcttggtcgtattgcaagccacttttatatccagtat
actagtgttgaaacttacaatgaaatgttgacacgccatatgaatgaaagtgagttgata
agtatggtagctcattcttcggaatttgaaaatattgtggtccgagatgaggaacaaaat
gagcttgagatgttggctcgcacatattgtcaattggaagtcaagggtggtccatctaac
aaatatggaaaagtttcaattcttattcagctgtacatctctcgaggatcaattgacacg
ttttcactaatctctgatgcggcttatataagtgcaagcttggctcgtatcatgcgggct
ctttttgagatttgcctccgtagaggatggtgtgagatgtctgctctcatgttagactac
tgcaaggctgtggatcgccaaatatggccccatctacatcctcttagacagtttgacaga
gatatttcatcagaaatattgaggaagcttgaagaaaggggagctgatttggatcgttta
caagagatgcaagagaaagatattggagctttgattcgttatgcacctggaggaaaggtt
gttaagcaatttctgggatatttcccattagtccagttgtctgctacagtcagtccaatc
actagaacagttctgaaggtggatttggttgtagctccacagtttgtttggaaggatcga
tttcatggcactgcactgcgctggtggattttggttgaggattctgagaatgaccacatt
taccattccgagctcttcaccctcacaaagaagatggccagagcggaaccacataaacta
tcttttactgtgccaatctttgagccacatcctccgcagtactacattcgtgctgtttct
gactcatggctacatgcagacgctttgtacatcataaatctccacaaacttgctcttccg
gaggtccaaacatcccacactgaacttctagatttgaaaccccttcctgtgactgcactt
ggcaatggaacttttgaggccttgtataaattttctcacttcaatcctatacaaacacag
gcttttcatgtgctgtatcacaccgacaaaaatatcctcttaggagctccgactggaagt
gggaagactatatcagctgagcttgctatgctccatttattcaatacacagcctgatatg
aaggttatctatatagcacctttaaaggctattgttcgtgagagaatgacggactggaga
aagcgtcttgtttcccaacttggaaagaagatggttgaaatgactggtgactacaccccg
gatctaatggctctcttgtcagcagacatcattatctccactcctgaaaagtgggacggt
atcagtcgtaattggcacagtcgaagctatgtcactaaggttgggcttatgattttggat
gagattcatttacttggagctgatcgaggacccatacttgaggttattgtctcaaggatg
agatacatatcttctcaaacagagcgctcagttcggtttgttggcctgtcaacagcatta
gcgaatgcacataatttggctgattggttgggtgttgatgaaaatggtctcttcaatttc
aagccaagtgtgaggcccgttcctcttgaagttcatattcagggatatcctgggaagttc
tactgcccgaggatgaatagtatgaacaagcccgcatatgctgctatatgtacccattca
ccaacaaaaccagttctaatctttgtctcatctcgtcgccaaacaaggcttacggcactg
gaccttattcagtttgcagcttcagatgagcacccgaggcagttcataaacatgccagaa
gatgcacttcagatggttctttctcaagtcacagaccagaacttgaagcacaccttacaa
tttggaattggattgcaccatgctggactgaatgataaagacagatcattggtcgaggaa
ttatttgcaaacaacaagattcaggtgttggtctgtacaagtacgttagcatggggtgta
aaccttcctgcacatttggttattattaagggaacagagtactatgatgggaaggcaaaa
agatatgttgatttcccaatcactgatatattacaaatgatgggtcgagcgggtcgtcca
caatatgatcaacatggaaaagctgttattcttgttcatgaacccaagaagagcttctat
aaaaagtttctgtatgaaccattcccagttgaaagtagcctgagagagcaattgcatgac
cacatcaatgctgagatcgttacgggaacaatctgtcataaagaggatgcagtgcattat
ctcacttggacctacttattccgtagattgatggttaacccagcttattatggcttagag
gttgcagaacctgggattctaaattcttatttgtctagcttggtgcaaagcacatttgag
gatctagaagatagtggatgcatcaagattactgacgatagtgtcgaaccactgatgttg
ggctcaatagcatctcaatattatctcaagtacaccactgtatcaatgtttggctcaaaa
ataggacctgatacatctctcgaggttttcctacaaatactatctggtgcttcagaatac
gatgagctccccgtgaggcataatgaggaaaactacaatgaaaaattatcagagaaagtt
ccatatgctgtcgaccacagtcgcctagatgaccctcatgtgaaagcaaatttgctcttt
caggctcatttttcccaatcagagctaccaatcagcgattatgtcacagacttgaagtct
gtgctggatcaaagtatacgtgttattcaggccatgatagatatttgtgctaatagtgga
tggctgtcaagtaccattacctgtatgcatctgttgcaaatggtcatgcagggattgtgg
tttgacagggactctcctttttggatgttaccatgcatgactgatgatctagtcagctta
ttgcataaaaaaggtattgctagtatccagcagctgttggattgtccttcaaaatctttg
ccagctatcactgggagttcagctgcctcgagactctatcaggatatgcagcacttccct
cggattcaagttcgactaaagattcagaagaaggaatctaatggtggcaagatttttacc
ttgaacattagattggaagatgcgaacactcagcgaagaacagcaaaagcttttacccca
cgatatccaaaggtaaaagatgaagcttggtggttagtcctttgtaatacttcggcaagt
gaactgtatgctctgaagagaatgtctttctctggtcgtttgcagacaaacatggatttg
ccatccgttctgaccaatttccaggggataaagctcattctagtatcggattgttatctt
gggtttgagcaagaatactcgatcgaaggattggcataa
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integrated database retrieval system
