Nicotiana tabacum (common tobacco): 107780339 Help Entry 107780339         CDS       T04643                                  Name (RefSeq) DNA repair helicase XPB1-like   KO K10843   DNA excision repair protein ERCC-3 [EC:5.6.2.4] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03022   Basal transcription factors nta03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     107780339   09124 Replication and repair    03420 Nucleotide excision repair     107780339  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nta03021]     107780339    03400 DNA repair and recombination proteins [BR:nta03400]     107780339 Enzymes [BR:nta01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      107780339 Transcription machinery [BR:nta03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      107780339 DNA repair and recombination proteins [BR:nta03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      107780339 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom SWI2_SNF2 AAA_22 Motif Other DBs NCBI-GeneID:  107780339 NCBI-ProteinID:  XP_016456350 UniProt:  A0A1S3YWE0 LinkDB All DBs Position Un AA seq 757 aa AA seqDB search MGIGEKGRLNKKIKFSIRPTIIESEDEEEENGDNYFDSELLIYDSDNKGVELLRDFTKLE LKPDHENRPLWVCSDGRVFLETFSPLYKQASDFLIAIAEPVSRPQSIHEFNLTPHSLYAA VSVGLHTHTIISVFNKLSKTKLPEEVVDFIQASTSNYGKVKLVLKQNRYLIESPYAEVLE KLLMDDVISRARIASSDLGLLSELTSEEKETRYSFEIDSAQVESVKQRCLPNALNYPMLE EYDFRNDTVNPDLDMELKVNAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSA ATRIKKSCLCLATNAVSVDQWAYQFRLWSTIRDEQICRFTADSKEQFRRDIAAGVVVTTY NMIAFGGKRSEESDKLIEEIRNREWGLLLLDEVHVVPAQMFRKVISLTKSHCKLGLTATL VREDERITDLNFLIGPKLYEANWSDLAKGGFIANVQCAEVWCPMTKEFFAEYLKQENQRK RQALYVMNPNKFRACEFLIRFHEQQRADKIIVFSDNLFALMEYAMKLRKPMIYGGTSHAE RMKILEAFRTSPEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG RPRGRSGIEEHDAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSY YHVEEQLGLLGKVLSAGEDMVGLEEIEEEEEEDTDGKALRRANRSVGSMSTYSGAKGMIY MEYNGDQKKPGVGGLVQTKSKPKDLSKRHFLFKKRYV NT seq 2274 nt NT seq  +upstreamnt  +downstreamnt atgggtataggagaaaagggtcgtcttaacaagaagattaaattctcaattaggcctaca attattgaatcagaagacgaagaagaagaaaatggagataattatttcgattctgaactc ctaatttatgacagtgacaataaaggagtagaattactgagagattttactaagttagag ctcaaacctgatcatgaaaatcgtccgttgtgggtttgctccgacggtcgtgtttttctg gaaactttctctccgctttacaagcaagcttctgatttccttatcgccattgctgaacct gtttctcgccctcaatcaattcatgaatttaacctcacacctcactctctatacgctgcc gtttcggtcggccttcacactcatactattatctctgttttcaacaaattatcaaaaacg aaacttcccgaagaagtcgttgattttattcaagcttccacgtctaattacggtaaagta aaattagtactcaagcaaaatcgttacctcatcgaatccccgtacgcagaagtgttggaa aagttgcttatggatgatgttatatctcgagcaagaattgcaagtagtgatttagggtta ttatcagagttgacgagtgaagaaaaagagacgcgatattcatttgaaattgactctgca caagttgaaagtgtaaaacaacgttgcttaccaaatgctttaaattatccaatgttggaa gagtatgatttcaggaacgatactgtaaatcctgatttggatatggagttgaaagttaac gcgcagccgcggccttatcaagagaagagtcttagtaagatgtttgggaatggtagagct agatctggtattattgtgcttccgtgtggcgcaggcaagtcattggtgggtgtttctgca gccactagaattaagaaaagctgtctttgtttagctacaaatgcagtatctgttgatcaa tgggcttaccaattccggttatggtcaacaattcgagatgaacagatatgccgtttcact gctgatagtaaagaacaatttcgccgggatattgctgctggtgtagtggtgacaacttat aacatgattgcttttggagggaaacgttccgaagaatctgataaacttattgaagaaata agaaatagagaatggggattacttctcttagatgaggtccatgttgttcccgctcaaatg ttcaggaaagttatcagcctcacaaaatctcactgcaaacttggacttactgcaacatta gttagggaagacgaacggattactgatttgaatttccttattggtcccaagttgtacgaa gcgaattggtccgatttagccaaaggaggatttattgcaaatgtgcagtgtgctgaggtt tggtgtcccatgactaaggagttttttgccgagtacttgaaacaggaaaatcaaaggaag agacaggcattgtacgtaatgaatccgaataaattcagggcttgtgagtttctcatcagg ttccacgagcagcagcgtgctgataagatcatcgtgttttctgataacctgtttgcacta atggagtacgcaatgaagcttcggaagcctatgatctatggtggtaccagccacgcggag aggatgaaaatactcgaggcgtttagaactagtccagaagtgaacaccatttttctttca aaagtgggtgataactccatagacattcctgaggcaaatgtgatcattcaaatttcgtcg catgctggttcaaggcgccaagaggcacaacgactaggtcgtatactcagggcaaaaggg cgccctagagggagatcagggatagaggaacatgatgccttcttttactcgctcgtttca acggatacacaagaaatgtactactcaacaaagaggcagcaattcttgattgatcaaggt tatagctttaaggtgatcacaagtttgcctccgccggattcaggacctgagttgagttat taccatgttgaggagcagcttgggcttcttgggaaggtactaagtgccggcgaagatatg gttggcttggaggaaatagaagaagaagaagaagaagatacagatggcaaagcgcttcgt agagcaaatcgcagtgtgggatcaatgagcacttattcaggagccaaaggaatgatctat atggaatacaatggagaccagaagaaacctggagttggaggacttgtccagacaaagagc aagcccaaggatttgtccaagagacacttcttattcaaaaaacgctatgtttga

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