Nicotiana tabacum (common tobacco): 107780463
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Entry
107780463 CDS
T04643
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107780463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107780463
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107780463
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
107780463
NCBI-ProteinID:
XP_016456502
UniProt:
A0A1S4CPZ6
LinkDB
All DBs
Position
Un
AA seq
584 aa
AA seq
DB search
MNPSLKKPRESVDLLNESTASPFPDEVLEKVLSLVQSHKDRNSASLVCKDWYNAERWTRT
KLFIGNCYSVSPDIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADIQAWLDVFAKVYPF
LEELRLKRMTVSDESLEFLAKSFHGFKALSLLSCDGFSTDGIKSIATYCKRLTELDIQEN
GMDDIAGSWLSCFPDDFASLEVLNFASLNSEISFDALERLVSRCKSLRVLKVNKNINLDQ
LQRLLVRAPQLMELGTGSFHQELTSRQYAQVESAFSNCKHLHTLSGLWDATSLYLPVLYA
ACSSLTFLNLSYATIGSGELSKLLAHCQNLRRLWVLDTVEDKGLEAVGTSCPLLEELRVF
PADPFDQDIAHGVTESGFVAVSAGCPKLQYVLYFCRQMTNAAVATIVRNCPDFTHFRLCI
MNPGQPDYLTNEPMDEAFGAVVKTCTKLQRLSVSGLLTDQTFEYIGKYAKNLETLSVAFA
GSSDWGMQCVLDGCSKLRKLEIRDCPFGNAALLSGLDKYESMRCLWMSACNVTMNGCRLL
AKEMPRLNVEVIKDEDSDDYADKVYVYRSVAGPRRDAPPFVKTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcttgaaaaaaccgagggaatcggtggatttgttgaatgagtcaacagca
tcaccattcccagatgaggtgttggagaaggtgctgtcacttgtgcagtctcacaaggac
agaaactcagcttcattggtttgtaaggattggtacaatgcagagcgttggacaaggact
aagttgttcatcgggaactgctattcggtctctcctgatattgtagcaagaagatttccc
aagattaagagcgttacccttaaagggaagccaagattttccgactttaatttggtccca
gagaattggggtgctgatattcaggcttggcttgatgtttttgccaaagtttaccccttt
cttgaggagttgaggttgaagaggatgactgttagtgatgagagtttggagtttttggct
aaatcatttcatggatttaaggctctctctttgttgagttgtgatgggtttagcactgat
gggatcaaatccattgctacttactgcaagaggttgacagagctggacattcaggagaat
ggcatggatgatatcgctggtagttggctaagttgttttccagatgactttgcatcactg
gaggtgctaaactttgccagtctgaacagtgagatcagtttcgatgccctagagagactt
gtcagtaggtgcaaatcgctgagggttctgaaggtgaataagaacattaacttggatcaa
ttgcaacgcctgcttgtccgggctcctcagctgatggagctcggtacaggatcctttcat
caagaactcacgagtcggcagtacgcacaagttgaaagtgcattcagcaactgcaaacat
ctgcacactctctcaggtttatgggatgcgacttctctatatttaccagttctttatgca
gcctgttctagtctgacttttctcaacttgagctatgcaaccattgggagtggtgaatta
tcgaagcttcttgctcattgccaaaatttgagacgcctttgggtccttgacactgtcgaa
gataagggattagaggctgttggaaccagctgccccttgcttgaagaactgcgagtcttc
cctgccgacccttttgaccaggatatagcccatggggtgacggagtcgggctttgtggct
gtgtctgccggctgtcctaagcttcaatatgttctctatttttgccggcaaatgactaat
gctgctgttgcaacgatagtgcgtaactgccctgatttcacccattttcgtctctgcata
atgaatcctggccaaccagattacctgacaaatgaacccatggacgaggcttttggtgca
gtggtcaagacttgtacgaagctccagaggctttccgtttctggcctgttaactgaccag
acatttgagtatatcgggaagtatgccaaaaaccttgagacgctttcagtggcttttgct
ggaagcagtgactggggtatgcagtgcgtgcttgacggctgttctaagctgaggaagctg
gagataagggattgtccattcggaaatgcagcacttctttctggactggacaagtatgaa
tccatgcggtgtctttggatgtcagcttgcaatgtcaccatgaatggttgtcggctactt
gcaaaagagatgcctaggttgaatgtcgaggtaatcaaagatgaggacagcgatgactat
gctgataaagtgtacgtctatcgttctgtagcagggccacgaagagatgctccacctttt
gttaaaactctttag
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