KEGG   Nicotiana tabacum (common tobacco): 107780498
Entry
107780498         CDS       T04643                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nta03400]
    107780498
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    107780498
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 HIRAN DEAD zf-C3HC4_4 Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11 zf-RING_11
Other DBs
NCBI-GeneID: 107780498
NCBI-ProteinID: XP_016456535
UniProt: A0A1S3YWU9
LinkDB
Position
Un
AA seq 848 aa
IGRIPNEWARCILPLVRDKMIRIEGRCKSAPNILAIMDSVLLSIRVYINSSMFRKSHQTS
LKARSADDTVFHPLPTLFHLLGLTPFKKAEFTPADLYTRKRPLSEQDSSGSPASVLHVNL
SKSSSSADGDKVENDETISDTDLDYIVGSADNSEIQEMEPPSTLQCELRPYQKQSLHWMT
QLERGRSTDEAATTLHPCWDAYRLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADS
MGLGKTIMTIALLLSHSERGRSSRSQPTSQLSGENGEASNILGQSPTFAKKSAKFSSLDK
LLKHKPTLISGGNLIICPMTLLGQWKAEIEAHALPGALSLYVYYGQTRSKDTKVLARSDV
VLTTYGVLASEFSTENAEDSGGLFSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWC
LTGTPIQNNLEDIYSLLRFLRVEPWGSWAWWNKLVQKPFEEGDERGLKLVQQILRSIMLR
RTKSSTDREGRPILVLPPADIQVTYCELTEVERDFYDALYKRSKVKFDQFVEQGRVLHNY
ASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLNGGKETGEGKDVPSRAYIQE
VVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLTSWRSSTSGLCPVCRNIVSKQE
LITAPTDSRFQIDVEKNWVESSKVSALLGELERLRSVGSKSIVFSQWTAFLDLLQIPLSR
SNIPFVRLDGTLNQQQREKVIKKFSEEDGILVLLMSLKAGGVGINLTAASNAFVMDPWWN
PAVEEQAVMRVHRIGQTQQVMIKRFIVQGSVEERMEAVQARKQRMISGALTDQEVRTARI
EELKMLFA
NT seq 2547 nt   +upstreamnt  +downstreamnt
attgggcgtattccaaatgaatgggctcgatgtattctgccgttggtgagggataagatg
attagaattgaagggcgttgcaaatcggctcctaatatattggcgattatggactctgtt
cttttgtccatcagagtgtatattaatagctccatgttccgtaaaagccatcagacatca
ctaaaggctagatctgcagatgatacagtttttcacccccttccaactttgttccatttg
ctcggacttacaccttttaagaaggcagaattcactccagctgatttatacacgaggaag
cggcctttgagcgaacaggacagctctggtagtcctgcctcagtattgcacgtgaactta
tccaaaagctcttcatctgcagatggagataaagttgagaatgatgaaacaatttctgat
actgatcttgattatattgttggttcagctgataactcggagatacaggaaatggaacca
ccgagtacactccagtgcgaactgcgaccttatcagaagcagtcgcttcattggatgaca
caactggagaggggaagaagcacggatgaagcagcaacaactctgcatccatgttgggat
gcttaccgtctcaaagacgagagggagcttgttgtttacttgaatgcattttcgggtgat
gcgaccactgaattcccgagtacccttgaaatggctagaggaggaattttggcagattca
atggggttagggaagactataatgactatagctctcctcctcagtcattctgaaagaggt
agatcatcaaggagccaacctacaagccagctgtctggtgaaaatggtgaagctagtaat
attttaggccaatctccaacttttgcaaagaaatcagcaaaattctctagtcttgataag
ctcctgaaacataagcccacacttatctctggtggcaatctgataatatgtccaatgaca
ctactaggtcaatggaaggcagagattgaagcccatgcactacctggtgctctatctctt
tatgtttactatgggcagacaagatcaaaggatacaaaagtgcttgctcgaagtgatgtc
gtgctgacaacatatggagtgttggcctccgaattttctacagagaatgctgaggacagt
gggggacttttctctattagatggtttagagtggtgcttgatgaggcacatactatcaaa
tcttctaaaagccaaatctccaatgctgctgctgctcttattgctgaccgtcggtggtgt
cttactggtacccctatccagaacaatctggaggatatttacagtcttcttagatttttg
agggtcgaaccatggggaagctgggcatggtggaacaagcttgttcagaaaccttttgag
gagggagatgagagggggctaaagttggttcaacaaattttaagatcgatcatgttgaga
agaacaaagtctagtacagacagggaaggcagaccaattttagttctaccaccagctgat
attcaagtgacatattgtgaactaacagaagtagagcgcgacttctatgatgcattgtat
aaaagatccaaggtgaagtttgatcagtttgttgagcaaggacgagttctccacaactat
gcttctatattggaattgcttttgcgacttcgtcaatgttgtgaccacccatttcttgta
atgagtcgaggtgatacccaagaattctctgatctaaataagcttgctaaacgtttcctt
aacggtggtaaggagactggagaaggcaaagatgttccttcacgtgcttatattcaggag
gttgtggaagagttgcggaagggagaacagggagaatgtcctatttgtcttgaagctttt
gaagatgcagtcttgactccatgtgctcataggttatgtcgagagtgtctcttgacaagc
tggcgaagttctacctcgggcctttgtcctgtttgtagaaacattgtcagtaagcaggag
cttataacagccccgacagatagccgctttcagattgatgttgagaagaattgggtggag
tcatcaaaagtatcagccttgttgggtgaactagaacgtcttcgttccgttggctccaaa
agcattgtttttagtcagtggactgccttcttagatctattgcagattcctctttctcgt
agtaatattccatttgttcggcttgatgggacgttaaaccagcaacaacgtgagaaagta
ataaagaagttctcagaagaggatggcatattggtgttgctaatgtctttgaaggctggt
ggtgttgggataaacctgacggctgcatccaatgcttttgtcatggatccgtggtggaat
ccagctgttgaggaacaagcggtcatgcgcgttcatcgtattggacaaactcagcaagta
atgatcaaacgattcattgtgcagggttcagttgaggaaagaatggaggcagtacaagct
aggaagcaacggatgatttctggtgctttgacggaccaagaagttcggacagcaagaatt
gaggaacttaagatgctttttgcatag

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