Nicotiana tabacum (common tobacco): 107780634
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Entry
107780634 CDS
T04643
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107780634
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nta01009
]
107780634
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107780634
Protein phosphatases and associated proteins [BR:
nta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107780634
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
SR proteins
107780634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
107780634
NCBI-ProteinID:
XP_016456680
UniProt:
A0A1S3YX62
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All DBs
Position
Un
AA seq
220 aa
AA seq
DB search
MADSPRKRYSRSPSPWDEKSRSHSRSLSRSRSRSRSWPRPRGRSRSRSQGRAEVSNPGNT
LYVTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGIAFITMDSLEDANRCIKNL
NQSVLEGRYITVEKSRRKCPRTPTPGHYLGLESTQGDGYRGDRGRYRGRDDYGYRRPPRR
SPYRGVRGYSPRRSPCAGRSRRMRSRSHSPYERNYHRGSR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaggtattcccgctctccttctccttgggatgaaaagtca
agatctcactctcgctctctatcaaggtctagatcccgatccagatcatggccaaggcca
agaggaagatccaggtccagaagtcaaggaagggctgaagtttctaatcctggcaacaca
ctctatgtgactggattatctacaagggtcactgaaagggaccttgaggagcatttctca
aaggaaggaaaggtgaagtcagtttttctggttgtggagccccgttctcgtatctctcgt
ggtattgcttttataacaatggatagtcttgaggatgctaatcgctgcattaagaacctt
aaccagtctgtccttgaaggccggtacataacagtggagaagtctcgtagaaaatgccca
aggactccaacacctggtcattatcttggacttgagagcacacagggtgatggttatcgt
ggtgatcgtggtaggtatcgcggccgtgatgactatgggtatcgaagacctccaaggcgc
tcgccatatagaggtgtacgaggttattctcctaggcgctctccatgtgctggaaggtca
agacgtatgcgatcccggtcacattctccttatgagaggaactatcatcgtggttctaga
tag
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integrated database retrieval system
