Nicotiana tabacum (common tobacco): 107780745
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Entry
107780745 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107780745
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nta03016
]
107780745
Enzymes [BR:
nta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
107780745
Transfer RNA biogenesis [BR:
nta03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107780745
Prokaryotic type
107780745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
107780745
NCBI-ProteinID:
XP_016456811
UniProt:
A0A1S3YWV5
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Position
11:175484016..175491013
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AA seq
327 aa
AA seq
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MCFPAALALPSLPTLEPSSSNSTSNWSGKDEDPNKGQAVKLSLPAYKWRFVIAYDGTRFS
GWQYQQSTPTIQCILEEALTKITKLNRKDLCSVGASRTDAGVHAWGQVGHFITPFNYETL
EGVHQGLNGLLPLDIRVREISPAVPEFHARFSVTSKIYCYQVYNSTIMDPFTRHYAYHST
YKLDAAVMREAAGHFLGKHDFSAFANTSRNDRVPNPVKTIFRFDVVEKGPLLRLEVEGSG
FLYRQVRNMVALLLQVGRQAVPPDIVVRILESRDRKELAKYALQVPPHGLCLETINYKEE
HLRLPTDSPASSFGRHHSISYCKVPFI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttccagcagctttggcacttccatcacttcccactctcgagccgtcttcttcc
aattctacctctaattggagtggaaaggacgaagatccaaataagggtcaagcggtgaaa
ttgtcattaccagcttataaatggcgttttgttattgcttacgacggtaccagattctca
ggatggcagtatcagcagtcaacacctactatacagtgcattctggaagaagctctgact
aaaataacaaaattaaaccgcaaagatctttgttcagttggtgcaagtcgaacagatgca
ggagttcatgcatggggtcaggtgggacacttcattacgcctttcaactatgaaacgtta
gaaggcgttcaccaaggtttaaatggtcttcttcctcttgatatcagagttagagaaatt
agccctgcggtgcctgaatttcatgctcgtttctctgtcacaagcaagatttattgctac
caagtgtataattccactatcatggacccattcacgaggcactatgcttaccatagcaca
tataaacttgatgctgctgtcatgagagaggctgcagggcatttcttggggaaacatgac
ttttctgccttcgccaatacatcacgaaatgaccgggtgccaaatccagtgaagacgatt
tttcgctttgatgttgttgaaaagggacctcttttgcggcttgaagttgaaggatctggt
ttcctatatagacaagttcggaacatggttgctttgctgcttcaagttggaagacaagca
gttccaccagatattgttgttaggattttggaatctcgtgataggaaggaacttgcgaag
tatgccttgcaagttccacctcacggcctttgtctcgagactatcaactataaagaagaa
catctcagacttccaacagattcccctgcaagtagttttggtaggcaccatagtataagc
tattgtaaggtgccattcatatga
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