Nicotiana tabacum (common tobacco): 107780879
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Entry
107780879 CDS
T04643
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107780879
09122 Translation
03013 Nucleocytoplasmic transport
107780879
03015 mRNA surveillance pathway
107780879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107780879
03041 Spliceosome [BR:
nta03041
]
107780879
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107780879
Spliceosome [BR:
nta03041
]
Complex C
Other components
EJC/TREX
107780879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107780879
NCBI-ProteinID:
XP_016456973
UniProt:
A0A1S3YXY3
LinkDB
All DBs
Position
Un
AA seq
809 aa
AA seq
DB search
MSSPYPIIDNPPIDQLKVTELKEELKRRKLPIKGLKQELVKRLAEAILQEQDAAQSKSEN
DSDSTLGPKDEMAEPVDSENSKDDFDVGNITDKKADEKISEVDAAENRVQSDEGKFSTEE
PVGGAISTMVEKDPIDQFGDAKSSAPTEEDQIAEVSVVQTGEHVSVSVESATALSGQDSL
KYETQNESGDLKEQLENPISNSSLVEEKVSSSILERQVSEVSPVLGFQVKSDFVSTDVSI
GEKTELMDNVIANDVKLELDVKPEMVQLLSSSNVPDDAKLHPMDVEEPHDKKVSTEEPGK
ENDKYPEVSVVQTSDPVSVSIESATALSGQDSQKYEIQNESGDLKEQRENHISNSSLDEA
KVSSSNLETQVSELSPILGFQVKSDSVSPDISIDEKIELKDNVIANDVKLELDVKPEMVQ
LLSSSDVPDDAKLHPMDVEEPHDKKVSTEEPGNENDKYVDIMKTDGNGDSAEKLQLDRSP
GEDSMEEDVSEGKLADSKLDSVKEIDGKKEIEVDANREVGFVASVDDARSAAHIDTNVED
DSPTVLSMKRKLHDQRTATGSNDIIKRQRRWNSEDLKIPNNKKGDAVASTTPKDFFQPSL
RRSFSRSDSMAKEEPPKERVVPPSSKVPTNSLLIENFLRPFTLKAVQELLSKTGTVTNFW
MDAIKTHCFVSFSSVEEAIETRNAVYNLQWPPHGGKLLVAEFVDPQGVKDKVEAPPQSPS
THATPVTTIPAAALPSAQSQPSPRQQMQNKQLQPEKLPPPPLPEKLDPPIVTLDDLFKKT
KATPRIYYLPLSDEQVADKLKAQGKIIKQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccgtatcccattattgataatccgccaattgatcagttgaaggtcacagag
ctgaaagaagagcttaagagacgtaagctgcccattaaggggttgaagcaagagttggta
aagcgattagctgaagcaatcctccaagaacaggatgctgctcagtctaagtctgagaac
gatagtgattccacgcttgggccaaaggacgaaatggctgagcctgttgattctgagaat
tccaaggatgattttgatgttggcaatatcacagataagaaagcggatgagaaaataagc
gaggttgatgcagctgaaaacagagtgcaatcggatgaagggaaattctcaactgaggag
ccggttggtggtgctatttctactatggttgaaaaggatccgatagaccaatttggtgat
gcgaaaagcagtgctccaaccgaagaggaccagatagctgaggtcagtgttgtgcaaacc
ggtgaacatgtcagtgtgagtgtagagtctgccacagctttaagtggacaggactcacta
aaatatgaaacccagaatgagagtggagatttaaaagagcagttggagaatcccatttca
aattcttcactagtggaggaaaaggtcagttcatccattctggaaaggcaggtatctgag
gtcagccctgttttagggttccaagtaaaatctgattttgtttccactgatgtttcaatt
ggtgaaaaaacagaactgatggataacgtaatagctaatgatgtcaagttagaattagat
gttaaacctgagatggtgcagctattgtcgagcagtaatgtccctgatgatgcaaaattg
catcctatggatgtagaagaaccacatgacaagaaagtatctacagaagaaccaggcaag
gaaaacgataaatatcctgaagttagtgttgtgcaaaccagtgatcctgtcagtgtgagt
atagagtctgccacagctttaagtggacaagactcgcaaaaatatgaaatccagaatgag
agcggggatctaaaagagcagcgggagaatcacatttcaaattcttcactggatgaggca
aaggtcagttcatccaatctggaaactcaggtatctgagctcagccctattttagggttt
caagtaaaatctgattctgtttcccctgatatctcaattgatgaaaaaatagaactgaag
gataacgtaatagctaatgatgtcaagttagaattagatgttaaacctgagatggtgcag
ctattgtcgagcagtgatgttcctgatgatgcaaaattgcatcctatggatgtagaagaa
ccacatgacaagaaagtatctacagaagaaccaggcaacgaaaacgataaatatgttgat
ataatgaagacggatggcaatggggattctgcagagaagttgcaattagaccgaagtcct
ggtgaggattccatggaggaggatgtttcagagggtaaattagctgattctaagttggac
tcagtgaaagaaatagatggaaagaaagaaattgaagtggacgcgaatagggaggtagga
tttgttgcttctgtggatgatgctaggtcagctgcccatatagataccaatgttgaagac
gatagtcccactgtgctgtctatgaaaagaaaacttcatgatcaaagaacagcaactggg
agcaatgatattataaagaggcagcgtagatggaattcagaagatcttaaaattcctaac
aacaagaaaggtgatgctgtggcctcaactacccccaaggattttttccagccctctttg
agacgtagtttctctagatctgattcaatggccaaggaggaaccaccaaaagaacgtgtg
gttcccccatcatcaaaagtgcctactaattctctcttgatcgaaaattttctgcgccct
ttcaccttgaaagcggtgcaagagctacttagcaagacgggtactgtgacaaatttctgg
atggacgctattaaaacccactgctttgtttctttttcatctgtagaagaagctatagaa
actcgaaatgctgtatacaatctgcaatggcctccacatggaggaaagctacttgttgct
gagtttgttgatccccagggagtgaaagataaggttgaagcaccacctcaatctccttca
actcatgcaactcctgtgaccacaatcccggctgcggccctgccttctgcccagtcccaa
ccatccccaaggcaacagatgcagaacaagcaacttcaacctgagaaacttccaccacct
ccacttcctgagaaacttgaccctccaattgtcactctggatgatctctttaaaaagaca
aaggcaacacctcgcatttactatttgcccttgtctgatgaacaagttgcagataagttg
aaggcgcaagggaagattatcaagcagtag
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