Nicotiana tabacum (common tobacco): 107781173 Help Entry 107781173         CDS       T04643                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03018   RNA degradation Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107781173  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nta03019]     107781173 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      107781173   mRNA degradation factors    5'-3' decay     Decapping complex      107781173 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  107781173 NCBI-ProteinID:  XP_016457319 UniProt:  A0A1S3YYQ0 LinkDB All DBs Position 10:complement(161205060..161214503) Genome browser AA seq 814 aa AA seqDB search MEKFDSNDFSNLASSSSSISEGALFDASQYAFFGEEVELRDLEEDENNGVPLLGGGFGDD ELPEYHLFEKDEGSALGSLSDLDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRESSSA AEWTKEADFPDWFDQNLSDSECYQESKRWSSQPHLSAVHLAESKPLYRTSSYPEQPQQLQ HFLSEPILVPKSSFSSFPPPDGQSQQSSPCSHLRPQNISSLAAGPQSPYFTANLSSLSNS NMHLAGFSHGLHYGGNMSQLNTTGLSLNNRLQNQWTSHAGLIHGDHSSLLNSILPHQFPH QNGLLSPQIMSPLQQQRLHLAVQPSLGHFSALQSQLFNSCPSPLHLSKYGLADFRNPRSK SSHKGRQSEYSSKQVTDGSNHRRESNVSQFRSKYMTGDEIESILKMQHSATHRNDPYVDD YYHQARLAKKAAESRSMRRFCPNKEQSSRSHNSTETQPHLHVDAQGRVSFSSIRRPRPLL ESDPPGLVSNDGSGEQKISEKPLEQEPTFAARITVEDGFYLLLEVDDIDRLLLFAQPQDG GAQLRRKRQILLEGMATSLQLVDPLGKSSSSVGLTAKDDIVFLWLVSLPKGRKLISRYLQ LLIPGGELARIVCMAIFRHLRVLFGGLPHDVEAAETITNLAKTVSACVSGMDLNSLSACL AAIVCSSEQPPLRPLGSPAGDGATVILKSVLDRATYLLTDPQVGGSFSMPNPALWQASFD AFFGLLTKYCLSKYDSIMQSIHAQTPSNTEMIGSEAARAVSREMPVELLRAGLPHTNEQQ RKLLFNFAQRSMPVTGFNAHGGSSEQINPESVSC NT seq 2445 nt NT seq  +upstreamnt  +downstreamnt atggagaaattcgatagtaatgatttcagcaacttggctagctcctccagctctatatca gagggtgcgctgtttgatgcatcacagtatgccttttttggggaagaagttgaattgagg gatttagaagaggatgaaaataatggtgttcctttgttgggaggtggatttggtgatgat gagttaccggaataccatttgtttgagaaagatgagggatcagctttggggtctttatct gacttagatgatctagcaactacattttcaaagttgaacagaaatgtcactgggcctagg catcctggagttattggcgaccgtggatcaggatctttttccagggaaagttcatctgcc gctgaatggacaaaggaggcagattttcctgattggtttgatcagaatttgtctgacagt gaatgttaccaggaaagcaaaagatggtcttcacagccacatctctctgctgtgcatctt gcagagtcaaaaccattgtatagaacatcctcataccctgagcaaccccaacaacttcag cacttcttaagtgaacccattttagtaccgaagtcatcgttcagttcttttcctcctcca gatggccagtctcaacaatcctcaccttgcagccatttacgtccgcaaaacatatcatct cttgctgctggacctcagtctccctatttcactgctaatctctcttctttgtcaaactct aatatgcatttggcaggcttttctcatgggctccattatggtggaaacatgtcacagttg aacaccactggcctttcacttaataaccggctgcaaaatcagtggaccagccatgcagga ctcatccatggggaccattctagtctcttaaacagtatcttaccacatcagtttcctcat caaaacgggctattatcccctcagataatgtcccctctgcagcagcagagactgcatctt gcagtccagccgtctttaggtcatttttcagcactacaatctcaattatttaattcctgc ccttcaccattgcatctgagcaaatatggattggcggatttcagaaatccaagatctaag tcatcacataaaggtagacagagtgagtattcatccaaacaagttactgacggtagtaac cacagaagggagagtaatgtgtcacagttcagatctaagtacatgactggtgatgaaata gagagcattctgaaaatgcagcattctgcaacacatcggaatgatccatatgtagacgat tattatcaccaagctcggcttgcaaagaaagcagctgagtcaagatcaatgcgacggttc tgtccaaacaaggagcaatcttcacggtcgcacaatagcacagaaacacagcctcatctt catgttgatgctcaggggcgggtttcattttcttctatccgcaggcctcgtcctcttctt gaatctgatccaccaggccttgtttctaatgatggcagtggtgaacagaagatatctgag aaacctttggagcaggaaccaacatttgcagctagaattactgtagaagatggtttctat cttctgcttgaggtcgatgacattgaccggctacttctgtttgctcagccccaggatggt ggtgctcaactcaggcggaaacggcaaatcctgttagaaggcatggcaacctcgcttcag ctcgttgacccccttggaaaaagtagcagttctgtagggcttaccgctaaagatgacatt gtatttttatggttggtatctcttcctaaaggccgaaagctcatatcaaggtaccttcag cttcttattcctggaggtgagcttgccagaatagtttgcatggcaatttttagacattta agggtcttgtttggtggccttccacatgatgtggaagcagcagagaccattactaatctt gcaaaaacagtctctgcatgcgtcagtggcatggacctcaattcgctcagtgcttgtcta gctgctattgtttgttcgtcagagcagcctcctctccgcccacttggaagccctgctgga gatggagccactgttattctaaagtctgttcttgatagggcaacttatctgttaacagat cctcaggttggtggcagcttcagcatgcctaatcctgccctttggcaggcgtcttttgat gccttctttggtctacttaccaagtattgtctgagtaagtatgacagtataatgcaatca atacatgcacagactccgtcaaacacagagatgattggttcagaggctgcaagagccgta agtagagaaatgcctgtcgagcttctacgtgcaggtcttccgcacacgaatgagcagcag aggaagctgctgttcaattttgctcagcggtccatgcctgttactggatttaatgctcat ggtggaagtagtgaacaaataaatcccgaatccgtaagctgctaa

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