Nicotiana tabacum (common tobacco): 107781198
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Entry
107781198 CDS
T04643
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107781198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107781198
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107781198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
IML1
Motif
Other DBs
NCBI-GeneID:
107781198
NCBI-ProteinID:
XP_016457355
UniProt:
A0A1S3YZ40
LinkDB
All DBs
Position
Un
AA seq
907 aa
AA seq
DB search
MKSRSGCKDRASDNETLANISRGAVGKLLKRVNKSRSSRGPKTDDSYLCKQDSTGKPENR
SRETEKHLTGTTVARATLDAECCTRDVLPNVPLEVENEGADVQYQRIEREDELDGIDWED
GSVHTLKSESNINEDTINGVTVEFDALPDSSKQKTVRRATAEEKELAEVVHKVNLLCLLA
RGRLVDTACNDPLIQASLLSLLPAHLLKLTDVPELTAKALTPLVSWFHSHFRVRGASDTE
KSFHSALASTLESQEGTSEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKLYPSGQS
PSKAGSGIFNSSTLMVAAPKYSPLSPAKSLADGKHNNGKSRATITDKSDKRMSPSTSDAQ
RDANDECIMKSERPKRKGDLEFEMQLEMALSSTAVEIVRNTMVSELADVQSTSSNVSPFK
KKKIKAEECSTSSHGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQN
VEAAAAACKLHLRYVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESV
ATSDVVHLRRETSDESKKREVAQSTATRSSLEDMELETRALTEPLPTNQQAYRNHRLYII
ERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWFREGLQVKANEIPAKVLKHS
GKQNKEQDVKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVPKNGRGQVDVWSEKCL
PPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILETYAE
EEERRQAKERKRSEAEALSRWYQLLASLITRQRLHNCYVDGASSQSAVNFATSNDKSSLL
ARDAEDTKKTPEYQQEKSEIAQSDSPPTVLAEDHAHVFVVEDQTVDEESSTRTKRCRCGF
SVQYEEL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccgaagcggctgcaaagatagagccagtgacaatgaaactcttgcaaacata
tctcgaggtgcagtgggaaaacttttgaaacgagtcaacaagtcacgcagctctcggggt
ccaaaaacagatgatagttacctatgcaaacaagattctacggggaagccagagaacaga
tcaagggagacagaaaagcatcttactggcactacagttgcaagggctacattagatgct
gaatgttgcactagagatgtgttaccaaatgtgccattggaagtggaaaatgaaggtgca
gatgttcagtatcagaggatcgagagggaagatgaacttgatggtattgattgggaagac
ggttcagttcatactttgaagtccgaaagcaatattaatgaagatacaatcaatggtgtg
actgttgagtttgatgctctgcctgattctagtaaacagaaaacagtacgccgagcaact
gcagaagaaaaggaattggctgaggttgtgcataaggttaacttgctttgtttactagcg
aggggcaggttggtagatactgcttgcaatgatcctcttatccaggcttctttactttcg
ctgctgccagcacatctgttgaagttaacagatgttccagaacttactgcaaaggctcta
actcctcttgtcagttggttccacagtcatttccgtgttagaggtgcaagtgatacagag
aagtcatttcattcagctttggcatcaactcttgagtctcaggaagggacctcagaagaa
gttgctgcattgtctgtagcactgtttagggctttgaatcttacgaccaggttcgtatca
atcttggatgtggcttccttgaagcctgaaattgagaaactatatccctctggtcaatcc
cctagcaaggctggtagcgggatatttaactcttcgacattgatggtggctgcaccaaag
tattctcctctctctcctgctaaatctttggccgatggcaagcataacaatggcaagtct
agagcaactattacagataagtctgataaaagaatgtcgccatcaacatcagatgctcag
cgtgatgctaatgatgaatgtattatgaagagtgagcgtccaaagagaaaaggggatctt
gaatttgagatgcagttggaaatggctctttcttccaccgcagttgaaattgttaggaac
actatggtctcagaactggcggatgtgcaaagtacttcatcaaatgtatcaccattcaaa
aagaagaaaattaaagcagaagagtgttcgacttcctctcatggaatatcaactgctgtt
ggatctaggaaagtaggggcgcctctatactgggcagaggtctattgcagtggtgagaat
ctgacggggaaatgggtgcatgttgatgttgtaaatgcaattaccgatggagagcaaaat
gtggaagctgcagctgctgcatgcaaattgcatttacgatatgttgttgcttttgctgga
aatggagctaaagatgttacacgcaggtactgtacaaagtggtacaagatagcatctgaa
cgagtcaactcaatttggtgggatgcagtattggcaccattaaaggagttggagtccgtg
gcgaccagtgatgttgttcatttgagacgggaaacttctgatgaaagcaagaaaagagaa
gtagcacaatcaacagcaaccaggagctctctcgaagatatggagttggaaactagggca
ctgactgaacctcttccaacaaatcaacaggcttacagaaaccatcggttatacataatt
gaaagatggcttaacaagtatcagattctttaccccaaaggacctgtattaggtttttgt
tctggtcatccagtatacccacgatcctgtgtacaaacactcaaaagaaaggaaaaatgg
tttcgtgaggggctccaagtgaaagctaacgagatccctgcaaaggttctgaagcattct
ggaaagcagaacaaagaacaggatgttaaagatgatgattatggcgaggaagattgtgga
ggaactgttgccctctatggacagtggcaaactgaaccactgtttcttcctcctgcagta
aatggcattgtacctaagaatgggcgtggtcaagtggatgtctggtccgagaagtgcctt
ccaccgggtacagtccacttgagattgccaaggttggttcctgttgctaaaaggctagaa
attgattttgcacctgctatggttggatttgaattccggaatggtcgatctctacctgta
tatgaggggattgtggtgtgtacggagttcaaggatgcaattctcgagacatatgcagaa
gaagaggagagacgacaggccaaagagaggaagaggtccgaagctgaagctctttctagg
tggtatcaacttcttgcatcacttattacccgacagaggctacacaattgctacgtggac
ggggcatcctcacaatcagctgtcaattttgcaacatccaatgataaatcctccctacta
gctcgtgacgctgaggatacaaaaaagactcctgaataccagcaagaaaaatctgagatt
gcgcaatctgatagtccaccaactgtgcttgcagaagaccatgcgcacgtattcgtagta
gaagatcagactgttgatgaagaaagttcaacaaggacaaaacgttgtcgttgtgggttt
tcggttcaatatgaggagctgtag
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