Nicotiana tabacum (common tobacco): 107782050
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Entry
107782050 CDS
T04643
Name
(RefSeq) AP-4 complex subunit epsilon-like isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107782050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107782050
Membrane trafficking [BR:
nta04131
]
Endosome - Golgi transport
Others
AP-4 complex
107782050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
HEAT
Cnd1
HEAT_2
HEAT_EZ
INTS1_R4
HEAT_GCN1
TOR1L1_N
PIK3R4-like_middle
RGS
NPHI_C
DUF4290
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
107782050
NCBI-ProteinID:
XP_075109218
UniProt:
A0AC58UIA6
LinkDB
All DBs
Position
1:119355517..119379936
Genome browser
AA seq
972 aa
AA seq
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MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVINEIETLKKRIIEPDIPKRKMKEYIIR
LVYVEMLGHDASFGYIHAVKMTHDDNLHLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAVMALHRFFQKSPSSI
CHLVSNFRKRLCDNDPGVMGATLCPLYDLIAADVNSYKDLVVSFVSILKQVAERRLPKSY
DYHQMPAPFIQIKLLKILALLGSSDKKASEQMYTIVGDIMRKSDSTSNIGNAILYECICC
VSSIHPNPKVLESAAEAVAKFLKNDSHNLKYLGIDALGRLIKISAEIAEQHQLAVIDCLE
VGNVTSQDPDDTLKRKTFELLYKMTKPSNVEVIVDRMIDYMMSINDNHYKTEIASRCVEL
AEQFAPSNQWFIQTMNKVFEHAGDLVNLKVAHNLMRLIAEGFGEDDDTADTQLRSSAVES
YLRIMGEPKLPSAFLQVICWVLGEYGTADGKYSASYITGKICDIAEAHSTDDMVKAYAVS
ALMKVYSFEIAAGRKVDMLPECESFIEELLASHSTDLQQRAYELQAVVGLDARAVENIMP
MDASCEDIEVDRELSFLNGYVQESLNKGAQPYIPENAQSGALTISSFRHEEQHGSSGHSL
RFEAYELPKPSVPSRPSPVPPVFSTELVPVPEPTYHTEFHEAVAPKLSASGTGSSEIKLR
LDGVQRKWGKQTYSSSSPSTSDFDTYKTQNGATQRDVPSSLSSKTRDVSYESRRQQEDIN
PEKQKLAASLFGGASKSEKRPAGAGHKASRPNSHTADKSHAEKTGPSDGGAAKASPQPPP
DLLDLGEPTSISSATSVDPFKQLEGLLDLNEGSPAPGSSGDSATKAPDFMSLYGETSFRG
QNMMGTENLLSTAEFSHAPDRNGHGTGSTVTNSTQLSKGPNLKDALEKDALVRQMGVTPT
SQNPNLFKDLLG
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggcggatttggacagtccaaagagtttctcgacctaatcaaatccatc
ggcgaagcccgatccaaagctgaagaagatcgaatcgtgattaacgagatcgaaaccctt
aaaaaacgaatcatcgagcctgatatacctaaaaggaagatgaaagagtacataatacga
ttagtgtacgtcgagatgttaggccacgatgcatcgtttgggtacatacatgctgtgaaa
atgactcatgatgataatttgcatcttaaacgtactggttatttagctgtgacgcttttt
ttgaatgaggatcatgacttgattatcttgattgtgaatactattcagaaggacttgaaa
tcggataattatttggtggtttgtgccgcgttgaatgccgtttgtaagttgattaatgag
gagactattccagcagtgttgccacaggtggtggagttgttagggcattctaaagaagct
gttaggaaaaaggctgttatggcacttcatcggttttttcagaaatcgccatcgtccatt
tgccatcttgtctccaatttcagaaagaggctatgtgacaatgatcctggcgtaatgggt
gctacactttgtcctctttatgatcttattgctgcagatgttaattcttataaggatttg
gttgtcagctttgtaagcattctaaaacaagtagcggaacggaggttgcccaagagttat
gattatcatcagatgcctgctccattcattcagatcaaattgttgaaaattctggcatta
ctgggaagcagcgacaaaaaagccagtgaacaaatgtatactattgttggtgacattatg
agaaaaagcgattcaaccagtaatataggaaatgctattctatatgagtgcatatgttgt
gtttcctcaatacatcctaaccccaaagtattagaatctgcggcagaagcagttgccaaa
tttttgaagaatgatagccataatctaaagtacttggggattgatgcgcttggtagattg
ataaagataagtgcagaaattgctgagcagcaccaactagcagtgattgattgtttagag
gttggaaatgttacttctcaggacccagatgacacactgaaacggaagacttttgagctg
ctgtataaaatgacaaagccatcgaatgtagaagttattgtcgaccgtatgattgattac
atgatgagcataaatgataaccattacaaaactgagatagcgtccagatgtgtcgaactg
gccgagcagtttgcaccgagcaatcaatggtttatccagaccatgaataaagtgtttgag
cacgcaggagatctagtaaatttaaaggtggcccacaacttgatgcggctgattgccgag
ggatttggagaagatgatgatactgcagatacccagctgagatcatcagctgtggagtca
tatttgcgcatcatgggagagccaaaacttccctctgcatttctccaggttatttgctgg
gtcttgggggagtatggaactgctgatgggaagtattctgcctcctatatcacagggaaa
atatgtgatattgctgaggctcattcaactgatgacatggtcaaggcttatgcagtatcg
gcacttatgaaagtatattcatttgaaatagcagctgggaggaaagtggacatgttgcct
gagtgtgaatcattcattgaagagttgttagcatcacactctacagatttacagcaacga
gcatatgaacttcaagcagttgttggcttagatgctcgtgctgttgaaaatattatgcca
atggacgctagttgtgaagacattgaggttgatagagaactatcttttctcaatggttat
gttcaagagtcactgaataagggggctcaaccctatattcctgagaatgcacaatcagga
gctttaactatcagtagttttagacatgaagaacagcatggatcctcaggacattctctt
agatttgaagcctacgagcttcctaaaccctctgtgccatcaagaccttctccagtccca
ccagtattctcaaccgaacttgttcctgtaccagaaccaacttatcacacagagtttcat
gaagctgttgcaccaaagttgtccgcatctggtacaggctcatctgaaatcaagctacga
cttgatggtgttcaaagaaagtggggtaagcaaacttattcttcttcctcaccatctact
tcagactttgatacctacaagactcagaatggagcgacacagcgtgatgtaccaagcagc
ttaagctcaaaaacacgtgatgtatcttatgaatcaagaaggcaacaagaggatattaat
ccggaaaagcaaaaacttgctgcttccctctttgggggcgcatcaaaatctgaaaaaaga
cctgctggtgctgggcacaaggcatcaaggccaaacagccatactgcagacaagtctcat
gcagaaaagactggaccttctgatggaggtgctgctaaagcaagtccccaaccacctcca
gacttgcttgacttgggtgaaccaactagtattagtagtgcaacttctgtggatccgttt
aagcaattggaaggcttgcttgacttaaacgaaggtagtccagctccaggttctagcgga
gatagtgctactaaagcgcctgattttatgtctctttatggggagacttccttccgtggg
caaaatatgatgggaacggaaaatctcctttcaaccgctgaattttcacatgcacccgac
agaaatggccatggaacaggaagtacagttacaaattcaacacaattaagtaagggcccg
aatctgaaagatgctttggaaaaagatgcacttgtgaggcaaatgggtgtgacaccaacg
agtcagaatcccaacttattcaaggatttgcttgggtaa
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