Nicotiana tabacum (common tobacco): 107782247
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Entry
107782247 CDS
T04643
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107782247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107782247
03041 Spliceosome [BR:
nta03041
]
107782247
03032 DNA replication proteins [BR:
nta03032
]
107782247
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107782247
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
Sm proteins
107782247
U2 snRNP components
107782247
Complex B
U1 snRNP components
107782247
U4/U6.U5 tri-snRNP components
107782247
Complex C
U2 snRNP components
107782247
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107782247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
107782247
NCBI-ProteinID:
XP_016458596
UniProt:
A0A1S4DQK0
LinkDB
All DBs
Position
Un
AA seq
133 aa
AA seq
DB search
MSRSLGIPVKLLHEATGHIVTVEMKSGEVYRGSMVECEDNWNCQLESITYTAKDGRVSQL
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSLGVGRGRAIAMRAKAQAAGGRG
AAPGRGVVPPVRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaagcttgggcataccggtaaagcttctacacgaagcgacggggcatatagtg
acggtagagatgaagagtggagaggtgtacagaggaagtatggtggagtgcgaggacaac
tggaattgccaactcgagagcatcacttacactgctaaagatggaagggtgtcacaacta
gagcacgtttttattagaggcagcaaagtcagattcatgataattcctgatatgcttaag
aatgctcccatgttcaagcggctagaagcaagaatcaagggcaaaggtacatcacttggt
gttggtcggggacgtgctattgctatgcgagctaaagctcaagctgctggtggtcgcgga
gcagcacctggtcgaggtgttgtgccacctgtaagaagataa
DBGET
integrated database retrieval system
