Nicotiana tabacum (common tobacco): 107782419
Help
Entry
107782419 CDS
T04643
Name
(RefSeq) putative CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107782419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107782419
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107782419
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107782419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
107782419
NCBI-ProteinID:
XP_016458789
UniProt:
A0A1S3Z2Y6
LinkDB
All DBs
Position
2:complement(66983626..66984637)
Genome browser
AA seq
291 aa
AA seq
DB search
MSSSATAPPPPPLPPSSPTAAPVKKTVVIRSVWSNNLESEFSLIRSLIDRYPFVSMDTEF
PGVIFRQDIRSRNPSDHYHTLKSNVDALKLIQVGLTLTDAAGNLPDLGCAYGFIWEFNFC
DFDVACDDHAPGSIELLRQHGLDFDKTRDRGANTTRFAELMMSSGLVCNDAVTYITFHSA
YDFGYLIKALTGRELPGALTEFHELLTVFFGNRVYDVKHLMMFCHNLYGGLDRVAATLTV
NRMVGKSHQAGSDSLLTWHVFQKLREVYFEDNEALTEKYAGVLYGLEILSP
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcagccaccgcccctccaccacctcctcttccgccgtcgtcccccacggcg
gcgccggtgaaaaaaactgttgtgatccggtccgtttggtctaacaacctcgaatctgaa
ttctccttgatccgtagcctaatcgaccgttatcccttcgtttctatggatactgagttc
cctggcgtcattttccggcaggatatacgctctcggaaccctagcgatcactaccacact
ctgaaatccaatgtggacgctcttaagctcatccaggttggtctcactctcactgacgct
gccggtaacctgccagacctcggctgtgcctatggattcatatgggagttcaatttttgt
gattttgacgtggcgtgtgacgatcacgcgccaggatcaatagagctgctccgtcagcac
gggctggactttgacaagacgcgtgaccgtggtgctaacaccacgcgctttgctgagttg
atgatgtcgtccggattggtctgcaacgacgctgtgacgtacatcacttttcacagcgcg
tatgattttggctaccttattaaggccctaacaggtcgtgaactgccaggtgcattgacg
gagtttcatgaattgttgacggtcttttttgggaacagggtttatgatgtgaaacacttg
atgatgttttgccacaacctttatggtggattggaccgggttgcagctactcttacggtg
aatcggatggtggggaagagtcatcaggccgggtctgatagcttgctgacctggcatgtg
tttcagaaactgagggaggtctactttgaggacaacgaggcgctgacagagaagtatgcc
ggtgttctctatgggttagagatcctttctccgtag
DBGET
integrated database retrieval system
