Nicotiana tabacum (common tobacco): 107783406
Help
Entry
107783406 CDS
T04643
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107783406
Membrane trafficking [BR:
nta04131
]
Protein recycling
Others
EARP complex
107783406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
107783406
NCBI-ProteinID:
XP_016459857
UniProt:
A0A1S3Z631
LinkDB
All DBs
Position
Un
AA seq
1100 aa
AA seq
DB search
MQSNSSSSSAPPFPLIPLVLLNGGQGQLSEGGFELSRFLFLGSLLFSSQGAGYGDGGMDL
SKVGEKILSSVRSARSLGLLPSSSDRPEVPERAAAAAALARVLAGLPPHQRHALSSSSEE
LSSIYGSKPPGQVVEELEEEFYEEEFDPVGHILEHIPSEDGELAYLEEQAALRLAQLDRI
SERLSRHVMEHHEVMVKGMDLVRQLERDLKIANVICMNGRRHLTSSRNEVSRDLIVSTNS
KRKQALLDVLPVLTELRHALDMQSTLETLVEEGRFSKAFQVLSEYLQILDTLSELSAAQE
MSRGVEVWLGKTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEV
LSETHSVLKTTVQEDLDNTNVQSTRLTYSDLCIQIPESKFRQCLLATLAVLFRLMCSYHA
IQSFRPEDKDDISSPSIERVPILSSVEDPLPTSAASCDTEMHGSSNINYRVEEARDDGST
ASSSGSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIYSASIHQFLITYE
DLNIFVLAGEAFCGSKAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEKENWLILPPETI
EVVSFAGLVGDGAALIVSSETSPNARLPRKSVHPIQTDSKRNGFSSWLKGGNPFLPKLNG
SSKEYLDSYLLNGSATQESGNSNEDSFDKSSLTNSDVNHVNGNASLSEDENEDLHADFID
EDSQLPSRIAKPGHSRNRSSHWNIEQIEAQTGSSLSLLRLLDKYARLIQKLEIVNVEFFK
GFCQLFGIFFHFVFETFGQQSTHPSGKAVTDTLSYRLKTALSRITQDCDQWMKPQSQSFS
SSPPSSSSTSFSHMDVTPTSPPSYLTGASLGLKERCAGADTIYVVARLLHRSKAHLQSML
LQNNGALVEDFYVHLVDAVPDLVDHIHKTTARLLLHINGYVDRIANAKWEVKELGVEHNG
YVDLLLGEFKHYKTRLVHGGIQKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMS
LDLQVLINGLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWARAHPEYSKGQIVGLINL
VSTMKGWKRKTRLEVLEKIE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaactcttcttcttcttctgctccgccttttcctttaattccactggttctt
ttaaatgggggtcaaggtcaattgagcgaaggtgggttcgaattatctaggtttttgttc
ttaggttctttgctcttctcttctcaaggagctggctacggcgacggtggcatggacttg
tctaaagttggtgagaagattttgagttccgttcgctccgccagatctcttggcctcctc
ccttcttcttccgatcgtcctgaggttcctgaacgagctgcagccgctgctgcccttgca
cgtgttctagctggactacctccccatcagagacatgctctgtcatcaagctcagaggaa
ttgagctctatatatgggagcaaacctcctggtcaagttgtcgaggagctggaggaagaa
ttctatgaagaggaatttgatcctgtcggacatattctggagcatattccttctgaagat
ggtgaactagcttacttggaagaacaggctgctcttagattagcacagctggacagaatt
tctgaacgcttgtcgcgccatgttatggagcatcatgaagtaatggtgaagggaatggat
cttgtccgacaactggaaagagacttgaagattgcaaatgtcatatgcatgaatggtcgc
agacatttaacttcttcaaggaatgaggtgtcaagggatcttattgtctccacaaattct
aaaagaaaacaagcactgttggatgtgcttccggttctgactgagctgcgtcatgcactt
gacatgcaatcaactcttgaaactcttgttgaggaaggaagattctcaaaggcgttccaa
gtactatcagagtatttacaaattttggacacactttcggagctttctgccgcacaagag
atgagccgtggtgttgaggtttggctagggaagactcttcaaaagctggattcactttta
ttaggagtgtgccaggatttcaaagaggagaactatgtaactgtagttgacgcttatgcg
cttattggagatgttgctggccttgctgagaagatacagagtttctttatgcaggaggtt
ctatctgaaacccactctgtgctgaagactaccgtacaagaggatctggacaacaccaat
gtgcaaagcactaggctcacatatagtgatctgtgcatccagatacccgaatccaagttc
aggcaatgcttgttagcaacactagctgttctttttaggttgatgtgttcatatcatgca
atacagagcttccggcccgaggataaggatgatatttcgtcaccaagcatagagagagtg
ccaattttatcctctgttgaagacccactacctacttctgctgcttcatgcgacactgaa
atgcacggttcgtccaatataaattatagggttgaagaggcaagggatgacggaagtaca
gcatcaagcagtggatccccctggtttcaactgaggaaagatgccacgacctttgtttca
catacattacttaggggtcgaaagaatctttggcaacttacaacaagtcgtgcagctgta
ttgctttcttcacctgctatttattctgctagcatccatcaattcttaataacttatgaa
gatttaaacatttttgtacttgccggggaagcattttgtgggagtaaagcagttgagttc
aggcagaaagtgaaatctgtttgtgaaagttatctagctgctttccatcggcaaaatatt
tatgctctcaagatggtgctggaaaaggagaattggctgatattgccaccggagacaata
gaagtagtaagctttgctgggcttgttggtgatggagcagctttgatagtttcatctgaa
acttctcccaatgctcgactgccacgcaaatctgtacatcctatacaaactgactctaag
aggaatggattttcaagttggcttaagggtggaaacccatttctgccaaaactaaatggt
agttccaaggaatacttggactcttatttgcttaatggatctgcaacgcaagaaagtgga
aactccaatgaagattcttttgataagagttctttgacaaacagtgacgtaaatcatgtc
aatgggaatgcttctttatctgaagatgaaaatgaagatcttcatgctgattttattgac
gaagatagccaactacctagccggattgctaaacctggtcattcaagaaatcgctcttca
cattggaacattgaacaaatagaagcacaaacaggatcatcacttagcctcctgaggtta
ttggataaatatgcgaggttgattcagaagttagagattgttaatgttgagttttttaag
gggttttgccaattgtttgggatcttctttcactttgtctttgagacctttggtcagcaa
agtactcatcctagtggaaaggctgtgactgacactctgtcgtataggcttaagactgca
ttatcacgaataacacaggattgtgaccaatggatgaaaccccagtctcaatcattttcc
tcctctcctccctccagctcaagcacatcattttctcacatggatgtcactcctaccagc
ccgccaagttacttaactggtgcatccttgggactgaaggaaagatgtgcaggtgctgac
actatatatgtcgttgctcggttattgcatagatctaaagcacatcttcagtcaatgctt
cttcaaaataacggggcacttgttgaggatttctatgtgcatttggtggatgctgtaccg
gaccttgtagatcatattcataaaacaactgctagattacttctccacataaatgggtac
gttgatcggattgccaatgctaaatgggaggtgaaagagcttggagtagagcacaatgga
tatgtagatcttttgcttggagaatttaagcattataaaacaaggcttgttcacggagga
attcagaaggaggttcaagacctcctcttagaatatggagttgataatgttgctgaaatt
ctcgttgaaggcctatctcgcgtgaagaggtgtactgatgaaggacgagctcttatgtca
ttagatcttcaggtattgataaacggcttgaaacatttcatctctgtagatgtgaggcct
aaattacagatagttgaaacattcatcaaggcctactaccttccagaaaccgagtttgtg
cactgggcacgtgctcatccggaatacagtaaaggtcagattgttggtctaatcaaccta
gtctctacaatgaaaggctggaaaaggaaaaccaggttggaagtgttggaaaagattgag
taa
DBGET
integrated database retrieval system