KEGG   Nicotiana tabacum (common tobacco): 107783406
Entry
107783406         CDS       T04643                                 
Name
(RefSeq) syndetin
  KO
K23288  syndetin
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107783406
Membrane trafficking [BR:nta04131]
 Protein recycling
  Others
   EARP complex
    107783406
SSDB
Motif
Pfam: Vps54_N Syndetin_C
Other DBs
NCBI-GeneID: 107783406
NCBI-ProteinID: XP_016459857
UniProt: A0A1S3Z631
LinkDB
Position
Un
AA seq 1100 aa
MQSNSSSSSAPPFPLIPLVLLNGGQGQLSEGGFELSRFLFLGSLLFSSQGAGYGDGGMDL
SKVGEKILSSVRSARSLGLLPSSSDRPEVPERAAAAAALARVLAGLPPHQRHALSSSSEE
LSSIYGSKPPGQVVEELEEEFYEEEFDPVGHILEHIPSEDGELAYLEEQAALRLAQLDRI
SERLSRHVMEHHEVMVKGMDLVRQLERDLKIANVICMNGRRHLTSSRNEVSRDLIVSTNS
KRKQALLDVLPVLTELRHALDMQSTLETLVEEGRFSKAFQVLSEYLQILDTLSELSAAQE
MSRGVEVWLGKTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEV
LSETHSVLKTTVQEDLDNTNVQSTRLTYSDLCIQIPESKFRQCLLATLAVLFRLMCSYHA
IQSFRPEDKDDISSPSIERVPILSSVEDPLPTSAASCDTEMHGSSNINYRVEEARDDGST
ASSSGSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIYSASIHQFLITYE
DLNIFVLAGEAFCGSKAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEKENWLILPPETI
EVVSFAGLVGDGAALIVSSETSPNARLPRKSVHPIQTDSKRNGFSSWLKGGNPFLPKLNG
SSKEYLDSYLLNGSATQESGNSNEDSFDKSSLTNSDVNHVNGNASLSEDENEDLHADFID
EDSQLPSRIAKPGHSRNRSSHWNIEQIEAQTGSSLSLLRLLDKYARLIQKLEIVNVEFFK
GFCQLFGIFFHFVFETFGQQSTHPSGKAVTDTLSYRLKTALSRITQDCDQWMKPQSQSFS
SSPPSSSSTSFSHMDVTPTSPPSYLTGASLGLKERCAGADTIYVVARLLHRSKAHLQSML
LQNNGALVEDFYVHLVDAVPDLVDHIHKTTARLLLHINGYVDRIANAKWEVKELGVEHNG
YVDLLLGEFKHYKTRLVHGGIQKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMS
LDLQVLINGLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWARAHPEYSKGQIVGLINL
VSTMKGWKRKTRLEVLEKIE
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgcagtcaaactcttcttcttcttctgctccgccttttcctttaattccactggttctt
ttaaatgggggtcaaggtcaattgagcgaaggtgggttcgaattatctaggtttttgttc
ttaggttctttgctcttctcttctcaaggagctggctacggcgacggtggcatggacttg
tctaaagttggtgagaagattttgagttccgttcgctccgccagatctcttggcctcctc
ccttcttcttccgatcgtcctgaggttcctgaacgagctgcagccgctgctgcccttgca
cgtgttctagctggactacctccccatcagagacatgctctgtcatcaagctcagaggaa
ttgagctctatatatgggagcaaacctcctggtcaagttgtcgaggagctggaggaagaa
ttctatgaagaggaatttgatcctgtcggacatattctggagcatattccttctgaagat
ggtgaactagcttacttggaagaacaggctgctcttagattagcacagctggacagaatt
tctgaacgcttgtcgcgccatgttatggagcatcatgaagtaatggtgaagggaatggat
cttgtccgacaactggaaagagacttgaagattgcaaatgtcatatgcatgaatggtcgc
agacatttaacttcttcaaggaatgaggtgtcaagggatcttattgtctccacaaattct
aaaagaaaacaagcactgttggatgtgcttccggttctgactgagctgcgtcatgcactt
gacatgcaatcaactcttgaaactcttgttgaggaaggaagattctcaaaggcgttccaa
gtactatcagagtatttacaaattttggacacactttcggagctttctgccgcacaagag
atgagccgtggtgttgaggtttggctagggaagactcttcaaaagctggattcactttta
ttaggagtgtgccaggatttcaaagaggagaactatgtaactgtagttgacgcttatgcg
cttattggagatgttgctggccttgctgagaagatacagagtttctttatgcaggaggtt
ctatctgaaacccactctgtgctgaagactaccgtacaagaggatctggacaacaccaat
gtgcaaagcactaggctcacatatagtgatctgtgcatccagatacccgaatccaagttc
aggcaatgcttgttagcaacactagctgttctttttaggttgatgtgttcatatcatgca
atacagagcttccggcccgaggataaggatgatatttcgtcaccaagcatagagagagtg
ccaattttatcctctgttgaagacccactacctacttctgctgcttcatgcgacactgaa
atgcacggttcgtccaatataaattatagggttgaagaggcaagggatgacggaagtaca
gcatcaagcagtggatccccctggtttcaactgaggaaagatgccacgacctttgtttca
catacattacttaggggtcgaaagaatctttggcaacttacaacaagtcgtgcagctgta
ttgctttcttcacctgctatttattctgctagcatccatcaattcttaataacttatgaa
gatttaaacatttttgtacttgccggggaagcattttgtgggagtaaagcagttgagttc
aggcagaaagtgaaatctgtttgtgaaagttatctagctgctttccatcggcaaaatatt
tatgctctcaagatggtgctggaaaaggagaattggctgatattgccaccggagacaata
gaagtagtaagctttgctgggcttgttggtgatggagcagctttgatagtttcatctgaa
acttctcccaatgctcgactgccacgcaaatctgtacatcctatacaaactgactctaag
aggaatggattttcaagttggcttaagggtggaaacccatttctgccaaaactaaatggt
agttccaaggaatacttggactcttatttgcttaatggatctgcaacgcaagaaagtgga
aactccaatgaagattcttttgataagagttctttgacaaacagtgacgtaaatcatgtc
aatgggaatgcttctttatctgaagatgaaaatgaagatcttcatgctgattttattgac
gaagatagccaactacctagccggattgctaaacctggtcattcaagaaatcgctcttca
cattggaacattgaacaaatagaagcacaaacaggatcatcacttagcctcctgaggtta
ttggataaatatgcgaggttgattcagaagttagagattgttaatgttgagttttttaag
gggttttgccaattgtttgggatcttctttcactttgtctttgagacctttggtcagcaa
agtactcatcctagtggaaaggctgtgactgacactctgtcgtataggcttaagactgca
ttatcacgaataacacaggattgtgaccaatggatgaaaccccagtctcaatcattttcc
tcctctcctccctccagctcaagcacatcattttctcacatggatgtcactcctaccagc
ccgccaagttacttaactggtgcatccttgggactgaaggaaagatgtgcaggtgctgac
actatatatgtcgttgctcggttattgcatagatctaaagcacatcttcagtcaatgctt
cttcaaaataacggggcacttgttgaggatttctatgtgcatttggtggatgctgtaccg
gaccttgtagatcatattcataaaacaactgctagattacttctccacataaatgggtac
gttgatcggattgccaatgctaaatgggaggtgaaagagcttggagtagagcacaatgga
tatgtagatcttttgcttggagaatttaagcattataaaacaaggcttgttcacggagga
attcagaaggaggttcaagacctcctcttagaatatggagttgataatgttgctgaaatt
ctcgttgaaggcctatctcgcgtgaagaggtgtactgatgaaggacgagctcttatgtca
ttagatcttcaggtattgataaacggcttgaaacatttcatctctgtagatgtgaggcct
aaattacagatagttgaaacattcatcaaggcctactaccttccagaaaccgagtttgtg
cactgggcacgtgctcatccggaatacagtaaaggtcagattgttggtctaatcaaccta
gtctctacaatgaaaggctggaaaaggaaaaccaggttggaagtgttggaaaagattgag
taa

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