Nicotiana tabacum (common tobacco): 107783470
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Entry
107783470 CDS
T04643
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107783470
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107783470
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
107783470
NCBI-ProteinID:
XP_016459929
UniProt:
A0A1S3Z6E8
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All DBs
Position
Un
AA seq
447 aa
AA seq
DB search
MAMGSLLSFSLSSLLLLLLLVGVYAGVQTTDSFDVRTVEKVQLKSSENLTMAASLEEIEE
KLSKHAVDDPEQVVSMVAESIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWQKNRKRLAD
CGIGFGRNAIGGRDGRYYVVTDSRDDDPVNPRPGTLRHAVIQEEPLWIVFNRDMVIQLKQ
ELIMNSFKTIDARGYNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSTTHFGW
RTMADGDAVSIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFAHHNEVMLLGHS
DSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYLAPTNPFAKEVTKRVDTAAGQWKGWNWRSEGDLMLNGAYFTPSGAGASASYARASS
LGAKSSSMVGAITSGAGPLACRRSRMC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggttcgttgctttcatttagtctcagttctctgcttcttcttttgctgctc
gtcggagtttacgccggtgttcagactaccgacagtttcgacgtcaggacagtggaaaaa
gtgcagttgaagagctctgaaaacttaacaatggcggcgagtttggaagagattgaggag
aaattaagcaaacatgcagtggatgatccagaacaagttgtgtccatggttgcagagagc
attaggaacagcactgagaggcgaagacttggatatttctcatgtgggacaggaaatcca
attgatgactgctggcgttgtgacccaaattggcaaaagaaccgcaagcgccttgctgat
tgtggcattggatttgggcgcaatgccattggtggtcgcgatggtcgttactatgttgtc
actgattcgcgcgacgatgaccctgttaaccccaggcccggtacccttcgccatgctgtt
atccaggaggagcctctatggattgttttcaaccgtgacatggtcatacaattgaaacag
gagctcattatgaacagtttcaagactatcgatgcccgtggctacaatgttcacatagcc
aatggtgcttgtatcacaattcagtttgttacaaatattattatccatggccttcacatt
catgattgcaagccaacggggaatgctatggtgaggagttcgacgacccatttcggctgg
aggacaatggctgatggtgatgccgtttcaatctttggctcaagccacatatgggttgat
cataactcactctctcactgtgctgatggtcttgttgatgctgttatgggctcaactgcc
attactatttctaacaatcatttcgcccatcataatgaggtcatgctattgggccacagt
gactcctacactagagacaagcagatgcaagtgacaattgcctataaccactttggagaa
ggtctcattcaaagaatgccaagatgcagacatggctacttccatgtggtgaacaatgac
tacactcactgggagatgtatgctattggtggaagtgctaaccccaccatcaacagtcaa
ggaaacagataccttgccccaactaatccttttgcaaaggaggtaacaaaaagggttgac
acagcagcaggtcaatggaagggttggaactggagatcagagggagacttgatgcttaat
ggtgcctatttcactccatcaggagctggagcttcagccagctatgcaagagcttcaagc
ttaggtgccaaatcctcttctatggtgggcgccataacttcaggtgctggtccccttgct
tgccgcagaagccgcatgtgctag
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