Nicotiana tabacum (common tobacco): 107783900
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Entry
107783900 CDS
T04643
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107783900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107783900
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107783900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107783900
NCBI-ProteinID:
XP_016460410
UniProt:
A0A1S3ZJ81
LinkDB
All DBs
Position
Un
AA seq
317 aa
AA seq
DB search
MANLPQSLSMLTAFGGGPGSTASASAAATQDRNKMQSAEQLVLELSNPDLRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQP
SSRLLKHIIRCYLRLSDNPRACDALRNCLPDMLRDATFSSCLREDPTTRRWLQQLIHNVN
GSRVALQAGGFDHLLVN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctgcctcagtcactctcaatgctcaccgccttcggaggaggaccgggcagc
acagcctcggcatccgccgctgcaactcaggaccgtaacaaaatgcaatcagcagagcaa
ctcgtgcttgaactcagcaaccccgatcttcgagaaaatgcccttcttgaactttctaag
aagagggaattattccaggacttagccccattgctatggaactcatttggtactatcgct
gctctcttacaggagatagtttccatctaccctgttttgtcaccgccaaacctgactcca
gcacaatctaatagagtttgtaatgctttagcacttcttcagtgtgtagcctctcaccct
gacaccagaatgttgttcctcaatgcacatattcctttgtatttgtacccttttctaaat
acgacaagcaaatcaagaccttttgaatatttgaggcttactagcttaggtgtcattggt
gccctcgtgaaggtagatgatactgaagtaatcagttttctactatcaacagaaataatt
cccctgtgtctgcgcacaatggagatgggcagtgaactgtcaaaaacggttgcaactttc
attgtgcaaaaaatacttctagatgatgtgggtctggattacatatgtaccacagcagag
aggttttttgcagttggccgagttttggggagtatggtaggtgcacttgctgagcagcct
tcatcacgattactgaagcacataattaggtgctatcttcggctgtcagataatccaagg
gcatgtgatgcactaagaaattgtctccctgatatgcttagggatgctacattcagtagt
tgccttcgtgaggatcctacaacgaggaggtggctacagcaattgattcacaatgttaat
ggtagccgtgttgctctacaggcaggaggatttgatcatttgctggtgaactaa
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