Nicotiana tabacum (common tobacco): 107784083
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Entry
107784083 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107784083
KO
K19022
AP-5 complex subunit beta-1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107784083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107784083
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
107784083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
107784083
NCBI-ProteinID:
XP_016460634
UniProt:
A0A1S3Z8F1
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All DBs
Position
5:complement(96098826..96103383)
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AA seq
1131 aa
AA seq
DB search
MSSELKPLSPSEWENLIDDYNHGGATRLLRWTSTNYAAIPLFNLTLSSLLRKDLPHNLKL
QLLIFLEEQQYNNQNDNVSSTFLNRLLETLRSVIQSPNDGVSTSFALKEQFLISSTSIFI
NSVSFPLNSVNSSFITPFESLIELLLTIINRPNHSVDRQTRSIACECLRELEIAFPCLLC
EIGSHLWSLCQSERTHAGQSYVLLLVTVVYNIVKLKPHVSFSNSSSTLVPFSVPRFLVDE
SCKDEVFVGGELSDLSNRELRRVISFLFEWPQNLTPWGLLEFMDKTLPVAAALDLQGSLL
KVQFSGLLYTYDPLLWHAYLVMYLSFMDSFEGQELEIASRLLLLSKESQHHLSFRLLVLH
WLVGLIRLVLRRDVEKRKNVVDMSLSFYPSVFDPLALKSLKLDLLAYCSALMDDEKGVVS
AKGSSGMTKEKLLEDGLVCVSAFKWLPPWSMETSVAFRAIYKFLIGQSHSDNDSISNKIL
VEPTIFHTVQRTLIDSLSEYRGLVPVIVGFTDRLLTCHKHRWLGERLLKTFDDHLLPKLK
IDYKLVSYFSILERIAESDKVSPSGLMEILTKFMVFLVEKHGPDTGLRSWGHGSKVLGIC
RTMILHQHSSKLFVGLSRLLSFTCLYFPDLEVRDNARIYLRMMICVPGKKLRDILNSGDQ
LPGISPSTHSSSFFSVQSPRISHDPKKSRSISSCMHLERVVPLLVKQSWSLSLSTLGLDA
KKPSYIEPIKDNVSPSEQSEFDKITDVTVISEANRHIQPPEPLRVMDSKISQIVEILRKH
FSFIPDLRRMPGFKIKIPCALRFESEPFSRIWGINMPANGVDTLPALYATVLKFSSAAPY
GSIPSCHIPFLLGQPPKSFYSFNQTNSLDIIPVENVSETSGDDKSFKAPVLIELEPQDPV
PGLVDVFIETNADNGQIIIGQLHNITVGIEDMFLKAIVPKDIPEDAVCRYYVDLFNALWE
ACGASTSTGRETFVLKGGRGVAAISGTRSVKLLEVPVASLIQAVERSLAPFIVCVTGDPL
TSLVKEGGVIRDVDWNEVTLGTSSTDDTISESSIVAGPLYLKYKDDEDEGGGYVQISKKN
LGSIQILIFLPPRFHLLFQMEVSDTSTLVRIRTDHWPCLAYVDDYLESLFC
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaactcaaacccttatcgccatcagaatgggaaaatctaatcgacgactac
aaccacggcggcgcaacacggctactccggtggacttccaccaactacgccgccattcct
ctctttaacctcacactttcatcactcctccgcaaagacctccctcacaatctcaaactc
caactcctcatcttcctcgaagaacaacaatacaacaaccaaaacgacaacgtttcatcc
actttccttaaccgtctcctcgaaactctaagatcagtcatccaatcaccaaacgacggc
gtttcaacttcattcgcgctcaaagaacagttcctcatctcgtccacttcgattttcatc
aattccgttagtttcccgttaaattctgttaattcgagttttattactccgtttgaaagc
ttaattgagcttctgttgactattatcaaccggccgaatcatagcgttgaccgacaaacc
cggtcgatcgcctgcgaatgcttacgtgagttagaaattgcttttccttgtttactttgt
gaaattggatcacatctatggagtttgtgccaaagtgaacgtactcatgctggccaaagc
tatgtattgttgttagttactgttgtttataacatcgtgaaattaaaacctcatgtatcg
tttagtaattcttcgagtacgttggttccgtttagtgtaccgaggtttttagtagatgaa
agttgtaaagatgaggtttttgtagggggggagttgtcagatttgagtaatagggagtta
aggagagtgatctcatttttgtttgaatggccacaaaatttgactccttggggtctcttg
gagtttatggacaagacattgccagttgctgcagctttagatttgcaggggtctttgttg
aaggttcagttttcagggttgctttatacgtacgatcctttgttatggcatgcttattta
gtcatgtatttaagctttatggactcgttcgaagggcaagagttggaaatcgcgagtcga
ctcttgttgttgtcgaaagaatctcagcatcatttgtctttccggttgctggtgctgcat
tggttagttggattgatacggttggtattgaggagggatgtggagaaaaggaagaatgtc
gttgatatgagcttgagcttttatccgtcagtgtttgatccgcttgctttgaaatcattg
aagcttgacttgcttgcctattgttctgctttgatggatgatgaaaaaggtgtagtgagt
gcaaagggaagttcgggaatgactaaggagaagttactcgaagacggccttgtttgtgta
tcagcttttaaatggttgcctccttggagtatggagacttctgtggcatttcgtgctatc
tataagtttttgattgggcagtctcactcagacaatgattctatctccaataaaatcctt
gtggagccaacaatcttccacactgtgcagagaacacttatagactctttgtctgaatat
agaggattggttcctgtcattgttggttttactgaccgcttattgacatgtcacaagcac
cggtggttgggggaacgcctacttaagacatttgatgaccacttgcttccaaaactcaag
atagattacaaattggtatcttacttctctatattggaaaggattgctgagagtgataaa
gtttctccaagtgggttaatggagatccttaccaagttcatggtatttcttgtcgaaaaa
catggtccagatacaggattaaggtcttggggtcacgggagtaaagttcttggaatttgt
cgaactatgatcctgcatcaacatagttccaaattatttgttgggttatctcgtctttta
tcattcacttgtctttatttcccagatctggaggttcgcgacaatgccagaatttacctg
cggatgatgatttgtgttcctgggaaaaagctaagagacattctaaacagtggggaccag
cttcctggaatttctccatctactcattccagctctttctttagtgttcagtctcctaga
atttctcacgaccctaaaaaatctaggagtatttcatcctgcatgcatcttgagcgcgtg
gtgccattgttggttaaacaatcttggtctttgtccctgtcaactctgggacttgatgcc
aagaaacctagttatatagaacccatcaaggacaatgtgtccccaagtgagcaaagtgag
tttgacaaaattacggatgttacagtgatctctgaagccaataggcacattcagcctccg
gagccattacgtgttatggattcaaagatttcgcaaattgttgaaatcttgaggaagcat
ttttcatttattcccgacttaagacgcatgccaggtttcaagattaagataccttgtgct
ttaaggtttgagtcagagcctttcagtcgcatttggggaatcaatatgccagctaatggg
gttgacacccttcctgccttatatgcaactgtgctcaagttctcttctgctgcaccatac
ggctctattccatcatgccatattccttttcttctaggtcaaccccccaaaagtttctat
tcgtttaaccagacaaattcccttgatattatccctgtggagaatgtatctgaaacttct
ggagacgacaaaagcttcaaagctcctgttctgattgaattggaaccgcaggatccagta
cctggtcttgttgatgttttcattgaaacgaatgcggacaatggtcagatcattatagga
cagctgcataacattacagtaggaattgaagatatgtttctcaaagctattgttccaaaa
gacatccctgaagatgcagtatgtcgatactatgtggatctgtttaatgccttgtgggaa
gcatgtggtgcatcaaccagcactgggcgggaaacatttgtacttaaaggaggcagaggg
gttgcagcaatcagtggtactcgctctgtgaagctactggaggttcctgtggcatcattg
atccaagcggtagagcgatccttggcaccttttattgtatgcgtaaccggtgatcctcta
accagcctcgtgaaggagggaggagttataagggatgttgactggaatgaggtgactttg
ggtacctcttccactgatgataccatctcagaatctagtatagttgcggggccgctttac
ctcaagtacaaggatgatgaagatgagggagggggttatgtccaaattagtaagaaaaac
cttggatcaattcagatcttaatattccttccgccaagatttcatctcctttttcagatg
gaagtgtctgatacttctacattagtccgaattagaacggatcactggccatgccttgct
tatgttgatgactatttggaatctttattttgctaa
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