KEGG   Nicotiana tabacum (common tobacco): 107784098
Entry
107784098         CDS       T04643                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03030  DNA replication
nta03410  Base excision repair
nta03420  Nucleotide excision repair
nta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107784098
   03410 Base excision repair
    107784098
   03420 Nucleotide excision repair
    107784098
   03430 Mismatch repair
    107784098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nta03032]
    107784098
   03036 Chromosome and associated proteins [BR:nta03036]
    107784098
   03400 DNA repair and recombination proteins [BR:nta03400]
    107784098
DNA replication proteins [BR:nta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107784098
  DNA Replication Termination Factors
   ELG1-RFC complex
    107784098
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    107784098
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107784098
  Check point factors
   HRAD17(Rad24)-RFC complex
    107784098
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Mg_chelatase Rad17 AAA_24 Viral_helicase1 RuvB_N RCF1-5-like_lid AAA_5 AAA_11 nSTAND3 AAA_19 AAA_25 AAA_28 AAA_assoc_2 DNAX_ATPase_lid ABC_tran MeaB bpMoxR AAA_30 IstB_IS21 AAA_18 AAA_7 AAA_3 RNA_helicase NTPase_1 DO-GTPase1 SRP54
Other DBs
NCBI-GeneID: 107784098
NCBI-ProteinID: XP_016460651
UniProt: A0A1S3Z8D0
LinkDB
Position
Un
AA seq 332 aa
MASSSTTTPSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIVLDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRL
MAVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFGFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACVGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKLSLVRKTAKAA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcttcttcttctacgacgacaccatcaggcccagaaatcccatgggtagagaagttt
cgacccacaaaggtatcggacatcgtaggaaacgaagatgctgtcgccagactccaagtt
attgctcgtgatggcaacatgcccaatcttatcttagccggtcctcctggtactggcaaa
accactagtattttggctcttgctcatgagcttttgggaccaaactataaggaggccgtt
ttggagctaaatgcatcagatgatagaggcatcgatgttgttagaaacaaaatcaagatg
tttgctcagaagaaagttaccctaccccctgggcggcacaaagtaattgttttggacgag
gctgacagcatgacgtctggagctcagcaagcactgaggaggacaatggaaatatactcg
aactccactcgctttgctcttgcctgcaacacttcttctaagattatcgagcctattcaa
agtagatgtgccctggtccgatttgcaagattatctgaccaagagatccttggacgcctt
atggccgtggttgcagcggaaaaagttccttatgtacccgaaggtcttgaagctattata
tttactgctgatggagatatgagacaggccttaaataacttacaagcaacacacagtgga
tttggttttgtcaaccaagagaatgttttcaaggtttgtgaccagccccatccgttgcac
gtgaaaaatatggtgcggaatgtccttgaagggaaattcgatgatgcttgcgtgggtcta
aaggctctatatgaccttggctattctcccaccgatattatcacaaccctcttccgaatt
ataaagaactatgacatggcagaatatgtcaaactggagttcatgaaggaaactggtttt
gcccacatgaggatctgcgatggggttggttcgtatctccagatgtgtggtctgctggct
aaactatcattggttcgaaaaacggctaaggctgcataa

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