Nicotiana tabacum (common tobacco): 107784867
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Entry
107784867 CDS
T04643
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107784867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107784867
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
SR proteins
107784867
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107784867
NCBI-ProteinID:
XP_016461544
UniProt:
A0A1S3ZB18
A0AC58RLY8
LinkDB
All DBs
Position
7:130926747..130934552
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AA seq
310 aa
AA seq
DB search
MGRLSRTIYVGNLPGDIREREVEDLFYKYGHIVEIELKVPPRPPGYAFVEFEDSRDADDA
IRGRDGYDFDGHRLRVELAHGGQGSSSYDRHSSYSSGSRGGVSRRSDHRVLISGLPSSAS
WQDLKDHMRRAGDVCFSQVFRGRDGMRGIVDYTNYEDMKYAIRKLDDSLFRNQFSRAYIR
VEEYDKRRSYSRSPSPYYSRGRVYSRSRSPRRSYSSQREVCLLGVNTLVAPRLSHAQGLF
PLLALFLDLNHDPDLHCHLHIVGGMQGAQAGVGAGASLILVHRGYPTETFQETKGKLKPN
SVVLCRLVGC
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggttaagtcggactatctatgtgggcaatcttcctggtgatattcgtgagaga
gaagtagaagatttgttttacaagtatgggcatatcgtggaaattgagttgaaagttcct
cctagaccacctggttatgcatttgtagagtttgaagattctcgtgatgctgatgatgcc
atccgtgggcgcgatggctatgactttgatggacatcgattacgagttgaacttgctcac
ggtgggcaaggatcatcatcatatgatcgccacagcagttatagtagtgggagtcgtggt
ggagtttctaggcgctcagaccatcgcgttctgatctctggactaccatcttctgcttca
tggcaagacttgaaggatcacatgcgccgagcaggagatgtctgtttctctcaagttttt
cgaggccgtgacggtatgagggggattgtggactataccaactatgaagatatgaaatat
gcgataaggaaacttgatgactctctctttcgcaatcagttctctcgagcgtatattagg
gtggaggagtatgataagagacgtagctattccaggagcccaagcccatattattcaaga
ggcagagtttattcaagaagcaggagtcctcgacggagctatagcagccagagagaagtg
tgtctcctaggggtaaatactctcgtcgctccgcgtctgtctcacgctcaaggtcttttt
cccctgctcgctctgtttctagatctcaatcacgatccagatctccactgtcacctccac
atcgtcggaggcatgcaaggagcccaagcaggagtcggagcaggagcttctcttattctc
gttcatcggggatatccgactgagactttccaagaaacaaagggcaaactgaagccaaat
tcagtagtactttgcagacttgttggatgttaa
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